Search results: The pahtway p4328 has 56 genes in the original annotation. Currently, there are 38 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
1959EGR2AT591 | CMT1D | CMT4E | KROX20early growth response 210q21.1CV:PGCnp
GO_Annotation
PMID:cooccur
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur		INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
92558CCDC64BICDR-1 | H_267D11.1coiled-coil domain containing 6412q24.23CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
4990SIX6MCOPCT2 | ODRMD | OPTX2 | Six9SIX homeobox 614q23.1CV:PGCnp
DMG:Jaffe_2016
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
9628RGS6GAPregulator of G-protein signaling 614q24.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014		G2Cdb.humanPSD
G2Cdb.humanPSP
321APBA2D15S1518E | HsT16821 | LIN-10 | MGC:14091 | MINT2 | X11-BETA | X11Lamyloid beta precursor protein binding family A member 215q11-q12CV:PGCnp
GO_Annotation
PMID:cooccur		Ascano FMRP targets
Potential synaptic genes
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur		CompositeSet
84516DCTN5-dynactin subunit 516p12.2CV:PGCnp
GSMA_IIE
PMID:cooccur
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
443ASPAACY2 | ASPaspartoacylase17p13.3CV:PGCnp
PMID:cooccur
8688KRT37HA7 | K37 | KRTHA7keratin 3717q21.2CV:PGCnp
DMG:Wockner_2014
9021SOCS3ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3suppressor of cytokine signaling 317q25.3CV:PGCnp
PMID:cooccur
3726JUNBAP-1jun B proto-oncogene19p13.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
55966AJAP1MOT8 | SHREW-1 | SHREW1adherens junctions associated protein 11p36.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10485C1orf61CROC4chromosome 1 open reading frame 611q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
725C4BPBC4BPcomplement component 4 binding protein beta1q32CV:PGCnp
PMID:cooccur
5173PDYNADCA | PENKB | SCA23prodynorphin20p13Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur		NEUROTROPHIN SIGNALING
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
1292COL6A2BTHLM1 | PP3610 | UCMD1collagen type VI alpha 221q22.3CV:PGCnp
DNM:Fromer_2014		CompositeSet
11077HSF2BP-heat shock transcription factor 2 binding protein21q22.3CV:PGCnp
1496CTNNA2CAP-R | CAPR | CT114 | CTNRcatenin alpha 22p12-p11.1CV:PGCnp
DNM:Fromer_2014
PMID:cooccur		INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur		INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
859CAV3LGMD1C | LQT9 | VIP-21 | VIP21caveolin 33p25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
952CD38ADPRC 1 | ADPRC1CD38 molecule4p15Association
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
2638GCDBP | DBP/GC | GRD3 | Gc-MAF | GcMAF | HEL-S-51 | VDBG | VDBPgroup-specific component (vitamin D binding protein)4q12-q13Association
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GR_WM
PMID:cooccur
10144FAM13AARHGAP48 | FAM13A1family with sequence similarity 13 member A4q22.1CV:GWAScat
CV:PGCnp
CV:PheWAS		Ascano FMRP targets
124ADH1AADH1alcohol dehydrogenase 1A (class I), alpha polypeptide4q23PMID:cooccur
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
5754PTK7CCK-4 | CCK4protein tyrosine kinase 7 (inactive)6p21.1-p12.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIE
55937APOMG3a | HSPC336 | NG20 | apo-Mapolipoprotein M6p21.33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
22797TFECTCFEC | TFE-C | TFEC-L | TFECL | bHLHe34 | hTFEC-Ltranscription factor EC7q31.2CV:PGCnp
2185PTK2BCADTK | CAKB | FADK2 | FAK2 | PKB | PTK | PYK2 | RAFTKprotein tyrosine kinase 2 beta8p21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
DNM:McCarthy_2014
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur		G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1960EGR3EGR-3 | PILOTearly growth response 38p23-p21Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
10444ZER1C9orf60 | ZYG | ZYG11BLzyg-11 related, cell cycle regulator9q34.11CV:PGCnpCompositeSet
Darnell FMRP targets
8573CASKCAGH39 | CAMGUK | CMG | FGS4 | LIN2 | MICPCH | MRXSNA | TNRC8calcium/calmodulin-dependent serine protein kinase (MAGUK family)Xp11.4CV:PGCnp
Expression
Network
PMID:cooccur		PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
Potential synaptic genes