DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ADSTS
Uniprot ID:
P25054
Source protein:
Adenomatous polyposis coli protein
Source gene:
APC
Class:
DEG_SPOP_SBC_1
Location:
2795:2799
E3 ligase:
SPOP
DEGRON score:
0.9671
ASA_SCORE:
90.28
COIL:
0.9438
CONS_SCORE:
0.2823
DSS_SCORE:
0.7504
HELIX:
0.045
FCONS_SCORE:
0.5939
RIG_SCORE:
0.5754
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2808A
TCGA-29-1776
OV
TCGA
ADSTS
DEG_SPOP_SBC_1
0.0833
p.P2808A
DO30810
OV
ICGC
ADSTS
DEG_SPOP_SBC_1
0.0833
p.S2794I
TCGA-29-1781
OV
TCGA
ADSTS
DEG_SPOP_SBC_1
0.75
p.S2794I
DO29578
OV
ICGC
ADSTS
DEG_SPOP_SBC_1
0.75
p.S2794T
TCGA-43-2581
LUSC
TCGA
ADSTS
DEG_SPOP_SBC_1
0.75
p.S2794T
DO26602
LUSC
ICGC
ADSTS
DEG_SPOP_SBC_1
0.75
p.R2801W
TCGA-AA-A00N
COAD
TCGA
ADSTS
DEG_SPOP_SBC_1
0.2778
p.R2801W
DO9876
COAD
ICGC
ADSTS
DEG_SPOP_SBC_1
0.2778
p.Q2804P
TCGA-WC-AA9A
UVM
TCGA
ADSTS
DEG_SPOP_SBC_1
0.1944
p.R2791W
DO228194
LICA
ICGC
ADSTS
DEG_SPOP_SBC_1
0.2222
p.S2793I
DO229045
LICA
ICGC
ADSTS
DEG_SPOP_SBC_1
0.7222
p.D2796G
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
ADSTS
DEG_SPOP_SBC_1
0.6087
p.D2796G
ACH-000878
Lung Cancer
CCLE
ADSTS
DEG_SPOP_SBC_1
0.6087
p.D2796G
HCC-15
lung
COSMIC
ADSTS
DEG_SPOP_SBC_1
0.6087
Drug responses associated with APC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
2795:2799
ADSTS
SPOP
0.9671
More...
Q27J81
Inverted formin-2
DEG_SPOP_SBC_1
1145:1149
ADSTS
SPOP
0.9983
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
515:519
ADSTS
SPOP
0.9834
More...
Q6VMQ6
Activating transcription factor 7-interacting protein 1
DEG_SPOP_SBC_1
949:953
ADSTS
SPOP
0.8767
More...
Q99684
Zinc finger protein Gfi-1
DEG_SPOP_SBC_1
38:42
ADSTS
SPOP
0.833
More...
Q9HBL0
Tensin-1
DEG_SPOP_SBC_1
1085:1089
ADSTS
SPOP
0.9906
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
161:165
ADSTS
SPOP
0.9942
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
476:480
ADSTS
SPOP
0.9991
More...
O60320
Protein FAM189A1
DEG_SPOP_SBC_1
337:341
ADSTS
SPOP
0.919
More...