DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ALSTT
Uniprot ID:
P35658
Source protein:
Nuclear pore complex protein Nup214
Source gene:
NUP214
Class:
DEG_SPOP_SBC_1
Location:
1302:1306
E3 ligase:
SPOP
DEGRON score:
0.9992
ASA_SCORE:
81.18
COIL:
0.88
CONS_SCORE:
0.3061
DSS_SCORE:
0.6415
HELIX:
0.028
FCONS_SCORE:
1.0923
RIG_SCORE:
0.632
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1307F
TCGA-C8-A1HL
BRCA
TCGA
ALSTT
DEG_SPOP_SBC_1
0.3056
p.S1307F
DO3952
BRCA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.3056
p.S1307F
DO11854
GBM
ICGC
ALSTT
DEG_SPOP_SBC_1
0.3056
p.L1310M
TCGA-VQ-A8P2
STAD
TCGA
ALSTT
DEG_SPOP_SBC_1
0.2222
p.L1310M
DO51761
STAD
ICGC
ALSTT
DEG_SPOP_SBC_1
0.2222
p.P1304L
DO227816
COCA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.7582
p.A1303T
DO228585
LICA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.7139
p.E1309K
DO37483
SKCM
ICGC
ALSTT
DEG_SPOP_SBC_1
0.3611
p.S1307T
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.3056
p.S1307T
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.3056
p.A1302V
SIDM00217
Colorectal Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.5825
p.A1302V
ACH-000999
Colon/Colorectal Cancer
CCLE
ALSTT
DEG_SPOP_SBC_1
0.5825
p.A1302V
SNU-1040
large_intestine
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.5825
p.L1310F
NCI-H2170
lung
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with NUP214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1302:1306
ALSTT
SPOP
0.9992
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7843:7847
ALSTT
SPOP
0.9031
More...
Q9BSQ5
Cerebral cavernous malformations 2 protein
DEG_SPOP_SBC_1
391:395
ALSTT
SPOP
0.8379
More...
Q9HCH0
Nck-associated protein 5-like
DEG_SPOP_SBC_1
541:545
ALSTT
SPOP
0.5091
More...
Q9NWS1
PCNA-interacting partner
DEG_SPOP_SBC_1
325:329
ALSTT
SPOP
0.8697
More...
Q9UKL3
CASP8-associated protein 2
DEG_SPOP_SBC_1
751:755
ALSTT
SPOP
0.6071
More...
Q9Y4R7
Tubulin monoglycylase TTLL3
DEG_SPOP_SBC_1
604:608
ALSTT
SPOP
0.9866
More...
O15480
Melanoma-associated antigen B3
DEG_SPOP_SBC_1
68:72
ALSTT
SPOP
0.9981
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
574:578
ALSTT
SPOP
0.9809
More...