DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ALSTT
Uniprot ID:
Q9Y4R7
Source protein:
Tubulin monoglycylase TTLL3
Source gene:
TTLL3
Class:
DEG_SPOP_SBC_1
Location:
604:608
E3 ligase:
SPOP
DEGRON score:
0.9866
ASA_SCORE:
71.76
COIL:
0.8436
CONS_SCORE:
0.3106
DSS_SCORE:
0.4037
HELIX:
0.0784
FCONS_SCORE:
0.9095
RIG_SCORE:
0.7469
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V601M
TCGA-HT-A4DS
LGG
TCGA
ALSTT
DEG_SPOP_SBC_1
0.25
p.V601M
DO44554
LGG
ICGC
ALSTT
DEG_SPOP_SBC_1
0.25
p.A598T
DO224801
COCA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.2778
p.A598T
DO233272
GACA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.2778
p.Q607K
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.6944
p.Q607K
NCI-H2342
lung
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.6944
p.Q607H
SIDM01779
Gastric Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.7582
Drug responses associated with TTLL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1302:1306
ALSTT
SPOP
0.9992
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7843:7847
ALSTT
SPOP
0.9031
More...
Q9BSQ5
Cerebral cavernous malformations 2 protein
DEG_SPOP_SBC_1
391:395
ALSTT
SPOP
0.8379
More...
Q9HCH0
Nck-associated protein 5-like
DEG_SPOP_SBC_1
541:545
ALSTT
SPOP
0.5091
More...
Q9NWS1
PCNA-interacting partner
DEG_SPOP_SBC_1
325:329
ALSTT
SPOP
0.8697
More...
Q9UKL3
CASP8-associated protein 2
DEG_SPOP_SBC_1
751:755
ALSTT
SPOP
0.6071
More...
Q9Y4R7
Tubulin monoglycylase TTLL3
DEG_SPOP_SBC_1
604:608
ALSTT
SPOP
0.9866
More...
O15480
Melanoma-associated antigen B3
DEG_SPOP_SBC_1
68:72
ALSTT
SPOP
0.9981
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
574:578
ALSTT
SPOP
0.9809
More...