DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALSTT
Uniprot ID:
Q9NWS1
Source protein:
PCNA-interacting partner
Source gene:
PARPBP
Class:
DEG_SPOP_SBC_1
Location:
325:329
E3 ligase:
SPOP
DEGRON score:
0.8697
ASA_SCORE:
61.76
COIL:
0.7016
CONS_SCORE:
0.3194
DSS_SCORE:
0.3997
HELIX:
0.2072
FCONS_SCORE:
0.7398
RIG_SCORE:
0.7734
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T329P
TCGA-2W-A8YY
CESC
TCGA
ALSTT
DEG_SPOP_SBC_1
0.7031
p.Q320E
TCGA-A2-A0EY
BRCA
TCGA
ALSTT
DEG_SPOP_SBC_1
0.1944
p.Q320E
DO3614
BRCA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.1944
p.N315H
TCGA-AZ-4315
COAD
TCGA
ALSTT
DEG_SPOP_SBC_1
0.0556
p.P333H
TCGA-BF-A1Q0
SKCM
TCGA
ALSTT
DEG_SPOP_SBC_1
0.2222
p.A334G
TCGA-CG-5717
STAD
TCGA
ALSTT
DEG_SPOP_SBC_1
0.1944
p.A334G
DO38272
STAD
ICGC
ALSTT
DEG_SPOP_SBC_1
0.1944
p.I330L
DO233786
GACA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.3056
p.V323F
DO229035
LICA
ICGC
ALSTT
DEG_SPOP_SBC_1
0.2778
p.R335Q
C3A
liver
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PARPBP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1302:1306
ALSTT
SPOP
0.9992
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7843:7847
ALSTT
SPOP
0.9031
More...
Q9BSQ5
Cerebral cavernous malformations 2 protein
DEG_SPOP_SBC_1
391:395
ALSTT
SPOP
0.8379
More...
Q9HCH0
Nck-associated protein 5-like
DEG_SPOP_SBC_1
541:545
ALSTT
SPOP
0.5091
More...
Q9NWS1
PCNA-interacting partner
DEG_SPOP_SBC_1
325:329
ALSTT
SPOP
0.8697
More...
Q9UKL3
CASP8-associated protein 2
DEG_SPOP_SBC_1
751:755
ALSTT
SPOP
0.6071
More...
Q9Y4R7
Tubulin monoglycylase TTLL3
DEG_SPOP_SBC_1
604:608
ALSTT
SPOP
0.9866
More...
O15480
Melanoma-associated antigen B3
DEG_SPOP_SBC_1
68:72
ALSTT
SPOP
0.9981
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
574:578
ALSTT
SPOP
0.9809
More...