DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALSTT
Uniprot ID:
Q9BSQ5
Source protein:
Cerebral cavernous malformations 2 protein
Source gene:
CCM2
Class:
DEG_SPOP_SBC_1
Location:
391:395
E3 ligase:
SPOP
DEGRON score:
0.8379
ASA_SCORE:
78.4
COIL:
0.6718
CONS_SCORE:
0.4736
DSS_SCORE:
0.5876
HELIX:
0.0414
FCONS_SCORE:
0.9422
RIG_SCORE:
0.6717
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R399H
TCGA-AJ-A3OJ
UCEC
TCGA
ALSTT
DEG_SPOP_SBC_1
0.2222
p.R399H
DO42753
UCEC
ICGC
ALSTT
DEG_SPOP_SBC_1
0.2222
p.S383N
TCGA-BR-7703
STAD
TCGA
ALSTT
DEG_SPOP_SBC_1
0.1111
p.G394D
TCGA-BR-8078
STAD
TCGA
ALSTT
DEG_SPOP_SBC_1
0.7198
p.A386V
DO52686
MALY
ICGC
ALSTT
DEG_SPOP_SBC_1
0.1944
p.S405C
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.0556
p.S405C
NCI-H650
lung
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.0556
p.I401N
SIDM00213
Thyroid Gland Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.1667
p.I401N
FTC-133
thyroid
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.1667
p.I393T
SIDM01587
Bladder Carcinoma
GDSC
ALSTT
DEG_SPOP_SBC_1
0.7078
p.S384C
ACH-000945
Lung Cancer
CCLE
ALSTT
DEG_SPOP_SBC_1
0.5833
p.S384C
NCI-H650
lung
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.5833
p.G386S
ACH-000980
Lung Cancer
CCLE
ALSTT
DEG_SPOP_SBC_1
0.1944
p.G386S
NCI-H1155
lung
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.1944
p.N401D
ACH-001060
Lymphoma
CCLE
ALSTT
DEG_SPOP_SBC_1
0.1667
p.R404M
ACH-001517
Endometrial/Uterine Cancer
CCLE
ALSTT
DEG_SPOP_SBC_1
0.0833
p.T399A
ACH-002121
Skin Cancer
CCLE
ALSTT
DEG_SPOP_SBC_1
0.2222
p.T399A
G-MEL
skin
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.2222
p.T393A
G-MEL
skin
COSMIC
ALSTT
DEG_SPOP_SBC_1
0.7139
Drug responses associated with CCM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1302:1306
ALSTT
SPOP
0.9992
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7843:7847
ALSTT
SPOP
0.9031
More...
Q9BSQ5
Cerebral cavernous malformations 2 protein
DEG_SPOP_SBC_1
391:395
ALSTT
SPOP
0.8379
More...
Q9HCH0
Nck-associated protein 5-like
DEG_SPOP_SBC_1
541:545
ALSTT
SPOP
0.5091
More...
Q9NWS1
PCNA-interacting partner
DEG_SPOP_SBC_1
325:329
ALSTT
SPOP
0.8697
More...
Q9UKL3
CASP8-associated protein 2
DEG_SPOP_SBC_1
751:755
ALSTT
SPOP
0.6071
More...
Q9Y4R7
Tubulin monoglycylase TTLL3
DEG_SPOP_SBC_1
604:608
ALSTT
SPOP
0.9866
More...
O15480
Melanoma-associated antigen B3
DEG_SPOP_SBC_1
68:72
ALSTT
SPOP
0.9981
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
574:578
ALSTT
SPOP
0.9809
More...