DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSSS
Uniprot ID:
Q13428
Source protein:
Treacle protein
Source gene:
TCOF1
Class:
DEG_SCF_TRCP1_1
Location:
931:936
E3 ligase:
BTRC
DEGRON score:
0.9956
ASA_SCORE:
81.6
COIL:
0.9587
CONS_SCORE:
0.394
DSS_SCORE:
0.858
HELIX:
0.0293
FCONS_SCORE:
0.9831
RIG_SCORE:
0.4905
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K928T
TCGA-13-1404
OV
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.3611
p.K928T
DO28083
OV
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.3611
p.G943R
TCGA-D1-A17M
UCEC
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.1389
p.G943R
DO43779
UCEC
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.1389
p.E937K
TCGA-EE-A180
SKCM
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.3056
p.E937K
DO47537
SKCM
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.3056
p.S922L
DO222919
BTCA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.0833
p.E927K
DO44299
CESC
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.2222
p.P921S
DO11854
GBM
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.0556
p.A926S
DO228377
LICA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.S941N
SIDM00278
Esophageal Squamous Cell Carcinoma
GDSC
DSGSSS
DEG_SCF_TRCP1_1
0.6389
p.S941N
ACH-000305
Esophageal Cancer
CCLE
DSGSSS
DEG_SCF_TRCP1_1
0.6389
p.S941N
EC-GI-10
oesophagus
COSMIC
DSGSSS
DEG_SCF_TRCP1_1
0.6389
p.P921L
SIDM00863
Burkitt's Lymphoma
GDSC
DSGSSS
DEG_SCF_TRCP1_1
0.0556
p.R941I
NCC021
kidney
COSMIC
DSGSSS
DEG_SCF_TRCP1_1
0.6389
Drug responses associated with TCOF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13428
Treacle protein
DEG_SCF_TRCP1_1
931:936
DSGSSS
BTRC
0.9956
More...
Q8IYG6
Leucine-rich repeat-containing protein 56
DEG_SCF_TRCP1_1
460:465
DSGSSS
BTRC
0.9835
More...
Q96S38
Ribosomal protein S6 kinase delta-1
DEG_SCF_TRCP1_1
499:504
DSGSSS
BTRC
0.9876
More...
Q9C0H9
SRC kinase signaling inhibitor 1
DEG_SCF_TRCP1_1
512:517
DSGSSS
BTRC
0.9672
More...
Q9H7S9
Zinc finger protein 703
DEG_SCF_TRCP1_1
169:174
DSGSSS
BTRC
0.9995
More...
Q9NQ76
Matrix extracellular phosphoglycoprotein
DEG_SCF_TRCP1_1
515:520
DSGSSS
BTRC
0.9943
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SCF_TRCP1_1
53:58
DSGSSS
BTRC
0.9394
More...
Q9C0H5
Rho GTPase-activating protein 39
DEG_SCF_TRCP1_1
168:173
DSGSSS
BTRC
0.9988
More...
Q86VQ1
Glucocorticoid-induced transcript 1 protein
DEG_SCF_TRCP1_1
393:398
DSGSSS
BTRC
0.9577
More...