DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGSSS
Uniprot ID:
Q86VQ1
Source protein:
Glucocorticoid-induced transcript 1 protein
Source gene:
GLCCI1
Class:
DEG_SCF_TRCP1_1
Location:
393:398
E3 ligase:
BTRC
DEGRON score:
0.9577
ASA_SCORE:
66.3333
COIL:
0.9327
CONS_SCORE:
0.6067
DSS_SCORE:
0.6615
HELIX:
0.0378
FCONS_SCORE:
0.9535
RIG_SCORE:
0.5334
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D389V
TCGA-91-6828
LUAD
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.2222
p.D389V
DO26150
LUAD
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.2222
p.D385N
TCGA-95-7948
LUAD
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.1111
p.D385N
DO25133
LUAD
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.1111
p.Y388C
TCGA-FD-A5C0
BLCA
TCGA
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.Y388C
DO44046
BLCA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.Y388C
SIDM01066
Melanoma
GDSC
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.Y388C
ACH-000650
Skin Cancer
CCLE
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.Y388C
IGR-37
skin
COSMIC
DSGSSS
DEG_SCF_TRCP1_1
0.1944
p.D389N
DO228965
LICA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.2222
p.G395W
DO229015
LICA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.7825
p.R390C
DO229470
SKCA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.25
p.P399Q
DO229272
THCA
ICGC
DSGSSS
DEG_SCF_TRCP1_1
0.3056
p.L400F
ACH-000786
Lymphoma
CCLE
DSGSSS
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with GLCCI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13428
Treacle protein
DEG_SCF_TRCP1_1
931:936
DSGSSS
BTRC
0.9956
More...
Q8IYG6
Leucine-rich repeat-containing protein 56
DEG_SCF_TRCP1_1
460:465
DSGSSS
BTRC
0.9835
More...
Q96S38
Ribosomal protein S6 kinase delta-1
DEG_SCF_TRCP1_1
499:504
DSGSSS
BTRC
0.9876
More...
Q9C0H9
SRC kinase signaling inhibitor 1
DEG_SCF_TRCP1_1
512:517
DSGSSS
BTRC
0.9672
More...
Q9H7S9
Zinc finger protein 703
DEG_SCF_TRCP1_1
169:174
DSGSSS
BTRC
0.9995
More...
Q9NQ76
Matrix extracellular phosphoglycoprotein
DEG_SCF_TRCP1_1
515:520
DSGSSS
BTRC
0.9943
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SCF_TRCP1_1
53:58
DSGSSS
BTRC
0.9394
More...
Q9C0H5
Rho GTPase-activating protein 39
DEG_SCF_TRCP1_1
168:173
DSGSSS
BTRC
0.9988
More...
Q86VQ1
Glucocorticoid-induced transcript 1 protein
DEG_SCF_TRCP1_1
393:398
DSGSSS
BTRC
0.9577
More...