DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
EKENK
Uniprot ID:
P17844
Source protein:
Probable ATP-dependent RNA helicase DDX5
Source gene:
DDX5
Class:
DEG_APCC_KENBOX_2
Location:
339:343
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5974
ASA_SCORE:
88.94
COIL:
0.796
CONS_SCORE:
0.4003
DSS_SCORE:
0.2498
HELIX:
0.1462
FCONS_SCORE:
0.6936
RIG_SCORE:
0.7802
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R331C
TCGA-BH-A0DZ
BRCA
TCGA
EKENK
DEG_APCC_KENBOX_2
0.1111
p.R331C
DO2919
BRCA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1111
p.R331C
DO222755
COCA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1111
p.T350S
DO222880
MELA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1389
p.R352G
DO231284
PACA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.0833
p.K343T
SIDM00534
Colorectal Carcinoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.6195
p.K343T
ACH-000986
Colon/Colorectal Cancer
CCLE
EKENK
DEG_APCC_KENBOX_2
0.6195
p.K343T
HT-115
large_intestine
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.6195
Drug responses associated with DDX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07550
Beta-2 adrenergic receptor
DEG_APCC_KENBOX_2
371:375
EKENK
APC,CDC20,FZR1
0.9351
More...
P17844
Probable ATP-dependent RNA helicase DDX5
DEG_APCC_KENBOX_2
339:343
EKENK
APC,CDC20,FZR1
0.5974
More...
P48681
Nestin
DEG_APCC_KENBOX_2
590:594
EKENK
APC,CDC20,FZR1
0.979
More...
Q3V6T2
Girdin
DEG_APCC_KENBOX_2
586:590
EKENK
APC,CDC20,FZR1
0.693
More...
Q6UB98
Ankyrin repeat domain-containing protein 12
DEG_APCC_KENBOX_2
1632:1636
EKENK
APC,CDC20,FZR1
0.9775
More...
Q96HR8
H/ACA ribonucleoprotein complex non-core subunit NAF1
DEG_APCC_KENBOX_2
163:167
EKENK
APC,CDC20,FZR1
0.962
More...
Q9P219
Protein Daple
DEG_APCC_KENBOX_2
589:593
EKENK
APC,CDC20,FZR1
0.9822
More...
Q53SF7
Cordon-bleu protein-like 1
DEG_APCC_KENBOX_2
234:238
EKENK
APC,CDC20,FZR1
0.9886
More...
Q5T9S5
Coiled-coil domain-containing protein 18
DEG_APCC_KENBOX_2
281:285
EKENK
APC,CDC20,FZR1
0.6092
More...
Q92628
Uncharacterized protein KIAA0232
DEG_APCC_KENBOX_2
254:258
EKENK
APC,CDC20,FZR1
0.9987
More...