DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENK
Uniprot ID:
Q53SF7
Source protein:
Cordon-bleu protein-like 1
Source gene:
COBLL1
Class:
DEG_APCC_KENBOX_2
Location:
234:238
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9886
ASA_SCORE:
108.06
COIL:
0.551
CONS_SCORE:
0.5098
DSS_SCORE:
0.3236
HELIX:
0.412
FCONS_SCORE:
1.0763
RIG_SCORE:
0.7707
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N228H
TCGA-19-5956
GBM
TCGA
EKENK
DEG_APCC_KENBOX_2
0.1667
p.N228H
DO13863
GBM
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1667
p.E234D
TCGA-BS-A0UF
UCEC
TCGA
EKENK
DEG_APCC_KENBOX_2
0.5647
p.E234D
DO41488
UCEC
ICGC
EKENK
DEG_APCC_KENBOX_2
0.5647
p.I231V
TCGA-DU-7294
LGG
TCGA
EKENK
DEG_APCC_KENBOX_2
0.25
p.I231V
DO22333
LGG
ICGC
EKENK
DEG_APCC_KENBOX_2
0.25
p.K235T
TCGA-EO-A22R
UCEC
TCGA
EKENK
DEG_APCC_KENBOX_2
0.7306
p.K235T
DO42713
UCEC
ICGC
EKENK
DEG_APCC_KENBOX_2
0.7306
p.R246C
TCGA-LT-A5Z6
BLCA
TCGA
EKENK
DEG_APCC_KENBOX_2
0.1111
p.R246C
DO44029
BLCA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1111
p.R246C
DO233784
GACA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1111
p.F240V
DO233955
BPLL
ICGC
EKENK
DEG_APCC_KENBOX_2
0.2778
p.I225V
DO225120
BRCA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.0833
p.I225V
DO227903
BRCA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.0833
p.D245E
DO229035
LICA
ICGC
EKENK
DEG_APCC_KENBOX_2
0.1389
p.H239R
SIDM00659
Glioblastoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.H239R
SIDM00695
Melanoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.H239R
M059J
central_nervous_system
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.H239R
HT-144
skin
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.D236V
SIDM01007
T-Lymphoblastic Leukemia
GDSC
EKENK
DEG_APCC_KENBOX_2
0.7785
p.D236V
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.7785
p.I229V
SIDM00417
Plasma Cell Myeloma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.1944
p.I229V
SIDM01108
Non-Small Cell Lung Carcinoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.1944
p.C233Y
SIDM00214
Colorectal Carcinoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.C233Y
SNU-407
large_intestine
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.3056
p.S231N
SIDM01609
Endometrial Carcinoma
GDSC
EKENK
DEG_APCC_KENBOX_2
0.25
p.H224R
HT-144
skin
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.0556
p.H224R
M059J
central_nervous_system
COSMIC
EKENK
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with COBLL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07550
Beta-2 adrenergic receptor
DEG_APCC_KENBOX_2
371:375
EKENK
APC,CDC20,FZR1
0.9351
More...
P17844
Probable ATP-dependent RNA helicase DDX5
DEG_APCC_KENBOX_2
339:343
EKENK
APC,CDC20,FZR1
0.5974
More...
P48681
Nestin
DEG_APCC_KENBOX_2
590:594
EKENK
APC,CDC20,FZR1
0.979
More...
Q3V6T2
Girdin
DEG_APCC_KENBOX_2
586:590
EKENK
APC,CDC20,FZR1
0.693
More...
Q6UB98
Ankyrin repeat domain-containing protein 12
DEG_APCC_KENBOX_2
1632:1636
EKENK
APC,CDC20,FZR1
0.9775
More...
Q96HR8
H/ACA ribonucleoprotein complex non-core subunit NAF1
DEG_APCC_KENBOX_2
163:167
EKENK
APC,CDC20,FZR1
0.962
More...
Q9P219
Protein Daple
DEG_APCC_KENBOX_2
589:593
EKENK
APC,CDC20,FZR1
0.9822
More...
Q53SF7
Cordon-bleu protein-like 1
DEG_APCC_KENBOX_2
234:238
EKENK
APC,CDC20,FZR1
0.9886
More...
Q5T9S5
Coiled-coil domain-containing protein 18
DEG_APCC_KENBOX_2
281:285
EKENK
APC,CDC20,FZR1
0.6092
More...
Q92628
Uncharacterized protein KIAA0232
DEG_APCC_KENBOX_2
254:258
EKENK
APC,CDC20,FZR1
0.9987
More...