DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
EKENL
Uniprot ID:
Q5VZM2
Source protein:
Ras-related GTP-binding protein B
Source gene:
RRAGB
Class:
DEG_APCC_KENBOX_2
Location:
11:15
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8752
ASA_SCORE:
107.8
COIL:
0.725
CONS_SCORE:
0.2965
DSS_SCORE:
0.8154
HELIX:
0.2198
FCONS_SCORE:
0.9945
RIG_SCORE:
0.6504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E3K
TCGA-44-7670
LUAD
TCGA
EKENL
DEG_APCC_KENBOX_2
0.1111
p.E3K
DO23555
LUAD
ICGC
EKENL
DEG_APCC_KENBOX_2
0.1111
p.R18I
TCGA-AP-A1E0
UCEC
TCGA
EKENL
DEG_APCC_KENBOX_2
0.25
p.R18I
DO43154
UCEC
ICGC
EKENL
DEG_APCC_KENBOX_2
0.25
p.N14Y
TCGA-B5-A1MW
UCEC
TCGA
EKENL
DEG_APCC_KENBOX_2
0.7059
p.N14Y
DO42913
UCEC
ICGC
EKENL
DEG_APCC_KENBOX_2
0.7059
p.D5N
TCGA-BQ-7051
KIRP
TCGA
EKENL
DEG_APCC_KENBOX_2
0.1667
p.D5N
DO20778
KIRP
ICGC
EKENL
DEG_APCC_KENBOX_2
0.1667
p.K12R
TCGA-FI-A2D5
UCEC
TCGA
EKENL
DEG_APCC_KENBOX_2
0.7237
p.K12R
DO41331
UCEC
ICGC
EKENL
DEG_APCC_KENBOX_2
0.7237
p.M19I
TCGA-YD-A89C
SKCM
TCGA
EKENL
DEG_APCC_KENBOX_2
0.2222
p.M19I
DO219501
SKCM
ICGC
EKENL
DEG_APCC_KENBOX_2
0.2222
p.M19I
SIDM00720
Mesothelioma
GDSC
EKENL
DEG_APCC_KENBOX_2
0.2222
p.M19I
ACH-000648
Lung Cancer
CCLE
EKENL
DEG_APCC_KENBOX_2
0.2222
p.M19I
NCI-H28
pleura
COSMIC
EKENL
DEG_APCC_KENBOX_2
0.2222
p.D5H
DO223045
ESCA
ICGC
EKENL
DEG_APCC_KENBOX_2
0.1667
p.S4F
SIDM01323
Oral Cavity Carcinoma
GDSC
EKENL
DEG_APCC_KENBOX_2
0.5833
p.S4F
ACH-000732
Head and Neck Cancer
CCLE
EKENL
DEG_APCC_KENBOX_2
0.5833
Drug responses associated with RRAGB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AVK6
Transcription factor E2F8
DEG_APCC_KENBOX_2
4:8
EKENL
APC,CDC20,FZR1
0.7413
More...
P52179
Myomesin-1
DEG_APCC_KENBOX_2
128:132
EKENL
APC,CDC20,FZR1
0.9051
More...
Q3V6T2
Girdin
DEG_APCC_KENBOX_2
381:385
EKENL
APC,CDC20,FZR1
0.5571
More...
Q5VZM2
Ras-related GTP-binding protein B
DEG_APCC_KENBOX_2
11:15
EKENL
APC,CDC20,FZR1
0.8752
More...
Q71F23
Centromere protein U
DEG_APCC_KENBOX_2
196:200
EKENL
APC,CDC20,FZR1
0.9329
More...
Q8NEM0
Microcephalin
DEG_APCC_KENBOX_2
598:602
EKENL
APC,CDC20,FZR1
0.971
More...
Q9H0I2
Enkurin domain-containing protein 1
DEG_APCC_KENBOX_2
101:105
EKENL
APC,CDC20,FZR1
0.9868
More...
Q9UBT2
SUMO-activating enzyme subunit 2
DEG_APCC_KENBOX_2
616:620
EKENL
APC,CDC20,FZR1
0.9466
More...
Q9ULW0
Targeting protein for Xklp2
DEG_APCC_KENBOX_2
86:90
EKENL
APC,CDC20,FZR1
0.9952
More...
A6NNH2
Protein FAM90A27P
DEG_APCC_KENBOX_2
77:81
EKENL
APC,CDC20,FZR1
0.9811
More...