DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTSS
Uniprot ID:
O75333
Source protein:
T-box transcription factor TBX10
Source gene:
TBX10
Class:
DEG_SPOP_SBC_1
Location:
39:43
E3 ligase:
SPOP
DEGRON score:
0.9955
ASA_SCORE:
74.46
COIL:
0.8898
CONS_SCORE:
0.3644
DSS_SCORE:
0.6131
HELIX:
0.0482
FCONS_SCORE:
1.2068
RIG_SCORE:
0.5992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P52S
TCGA-17-Z051
LUAD
TCGA
PCTSS
DEG_SPOP_SBC_1
0.0833
p.G32R
DO233777
GACA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1389
p.P52L
DO50970
LICA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.0833
p.A48P
SIDM00090
Ovarian Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1944
p.A48P
ACH-000696
Ovarian Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.1944
p.A48P
OVCAR-8
ovary
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.1944
p.R30Q
SIDM01076
B-Lymphoblastic Leukemia
GDSC
PCTSS
DEG_SPOP_SBC_1
0.0833
p.R30Q
697
haematopoietic_and_lymphoid_tissue
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.0833
p.G38V
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.G38V
ACH-001127
Leukemia
CCLE
PCTSS
DEG_SPOP_SBC_1
0.3056
p.G38V
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.S33L
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1667
p.S33L
ACH-001127
Leukemia
CCLE
PCTSS
DEG_SPOP_SBC_1
0.1667
p.S33L
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.1667
p.A50V
ACH-001369
Ovarian Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with TBX10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13952
Nuclear transcription factor Y subunit gamma
DEG_SPOP_SBC_1
344:348
PCTSS
SPOP
0.9867
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
260:264
PCTSS
SPOP
0.9248
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1747:1751
PCTSS
SPOP
0.9941
More...
Q15916
Zinc finger and BTB domain-containing protein 6
DEG_SPOP_SBC_1
238:242
PCTSS
SPOP
0.9861
More...
Q86TB3
Alpha-protein kinase 2
DEG_SPOP_SBC_1
1609:1613
PCTSS
SPOP
0.9968
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
1532:1536
PCTSS
SPOP
0.9333
More...
Q96H55
Unconventional myosin-XIX
DEG_SPOP_SBC_1
677:681
PCTSS
SPOP
0.8963
More...
Q9BZ71
Membrane-associated phosphatidylinositol transfer protein 3
DEG_SPOP_SBC_1
81:85
PCTSS
SPOP
0.9091
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
39:43
PCTSS
SPOP
0.9955
More...