DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTSS
Uniprot ID:
Q96H55
Source protein:
Unconventional myosin-XIX
Source gene:
MYO19
Class:
DEG_SPOP_SBC_1
Location:
677:681
E3 ligase:
SPOP
DEGRON score:
0.8963
ASA_SCORE:
80.22
COIL:
0.9228
CONS_SCORE:
0.3798
DSS_SCORE:
0.3969
HELIX:
0.0414
FCONS_SCORE:
0.853
RIG_SCORE:
0.6401
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y669C
TCGA-2W-A8YY
CESC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.1111
p.Y669C
DO223732
CESC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1111
p.D684Y
TCGA-78-7160
LUAD
TCGA
PCTSS
DEG_SPOP_SBC_1
0.25
p.D684Y
DO26180
LUAD
ICGC
PCTSS
DEG_SPOP_SBC_1
0.25
p.P677L
TCGA-D3-A3MR
SKCM
TCGA
PCTSS
DEG_SPOP_SBC_1
0.7582
p.P677L
DO47256
SKCM
ICGC
PCTSS
DEG_SPOP_SBC_1
0.7582
p.G691A
TCGA-K4-A6MB
BLCA
TCGA
PCTSS
DEG_SPOP_SBC_1
0.0556
p.G691A
DO44077
BLCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.0556
p.A689D
SIDM02042
Pancreatic Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1111
p.P688L
SIDM00253
Neuroblastoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1389
p.Y687F
SIDM00930
Osteosarcoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1667
p.Y687F
ACH-001715
Bone Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.1667
p.C678R
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.719
p.C678R
SIDM01664
Prostate Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.719
Drug responses associated with MYO19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13952
Nuclear transcription factor Y subunit gamma
DEG_SPOP_SBC_1
344:348
PCTSS
SPOP
0.9867
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
260:264
PCTSS
SPOP
0.9248
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1747:1751
PCTSS
SPOP
0.9941
More...
Q15916
Zinc finger and BTB domain-containing protein 6
DEG_SPOP_SBC_1
238:242
PCTSS
SPOP
0.9861
More...
Q86TB3
Alpha-protein kinase 2
DEG_SPOP_SBC_1
1609:1613
PCTSS
SPOP
0.9968
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
1532:1536
PCTSS
SPOP
0.9333
More...
Q96H55
Unconventional myosin-XIX
DEG_SPOP_SBC_1
677:681
PCTSS
SPOP
0.8963
More...
Q9BZ71
Membrane-associated phosphatidylinositol transfer protein 3
DEG_SPOP_SBC_1
81:85
PCTSS
SPOP
0.9091
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
39:43
PCTSS
SPOP
0.9955
More...