DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PCTSS
Uniprot ID:
Q13952
Source protein:
Nuclear transcription factor Y subunit gamma
Source gene:
NFYC
Class:
DEG_SPOP_SBC_1
Location:
344:348
E3 ligase:
SPOP
DEGRON score:
0.9867
ASA_SCORE:
68.24
COIL:
0.7388
CONS_SCORE:
0.3282
DSS_SCORE:
0.5887
HELIX:
0.0582
FCONS_SCORE:
1.0328
RIG_SCORE:
0.6193
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q350H
TCGA-19-2621
GBM
TCGA
PCTSS
DEG_SPOP_SBC_1
0.2778
p.P349S
TCGA-55-1592
LUAD
TCGA
PCTSS
DEG_SPOP_SBC_1
0.3056
p.P343S
TCGA-60-2703
LUSC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.75
p.P349L
TCGA-D3-A5GU
SKCM
TCGA
PCTSS
DEG_SPOP_SBC_1
0.3056
p.G346R
TCGA-Q1-A6DW
CESC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.7568
p.V336L
DO224802
BRCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1111
p.P354T
DO222769
COCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1667
p.P355R
SIDM01070
Non-Small Cell Lung Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.1389
p.P355R
ACH-000840
Lung Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.1389
p.P355R
HCC-366
lung
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.1389
p.T343S
SIDM01237
Hepatocellular Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.75
p.T343S
ACH-001021
Liver Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.75
p.T343S
C3A
liver
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.75
p.R334T
SIDM00485
Oral Cavity Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.0556
p.R334T
ACH-000794
Head and Neck Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.0556
p.R334T
BICR22
upper_aerodigestive_tract
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.0556
p.E335K
ACH-000276
Breast Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.0833
p.E335G
ACH-000276
Breast Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.0833
p.P336R
HCC-366
lung
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with NFYC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13952
Nuclear transcription factor Y subunit gamma
DEG_SPOP_SBC_1
344:348
PCTSS
SPOP
0.9867
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
260:264
PCTSS
SPOP
0.9248
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1747:1751
PCTSS
SPOP
0.9941
More...
Q15916
Zinc finger and BTB domain-containing protein 6
DEG_SPOP_SBC_1
238:242
PCTSS
SPOP
0.9861
More...
Q86TB3
Alpha-protein kinase 2
DEG_SPOP_SBC_1
1609:1613
PCTSS
SPOP
0.9968
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
1532:1536
PCTSS
SPOP
0.9333
More...
Q96H55
Unconventional myosin-XIX
DEG_SPOP_SBC_1
677:681
PCTSS
SPOP
0.8963
More...
Q9BZ71
Membrane-associated phosphatidylinositol transfer protein 3
DEG_SPOP_SBC_1
81:85
PCTSS
SPOP
0.9091
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
39:43
PCTSS
SPOP
0.9955
More...