DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTSS
Uniprot ID:
Q14140
Source protein:
SERTA domain-containing protein 2
Source gene:
SERTAD2
Class:
DEG_SPOP_SBC_1
Location:
260:264
E3 ligase:
SPOP
DEGRON score:
0.9248
ASA_SCORE:
56.34
COIL:
0.802
CONS_SCORE:
0.658
DSS_SCORE:
0.3344
HELIX:
0.141
FCONS_SCORE:
0.9568
RIG_SCORE:
0.7278
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S269L
TCGA-63-A5MB
LUSC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.1944
p.S269L
DO52018
LUSC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1944
p.P273H
TCGA-AX-A2HD
UCEC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.0833
p.P273H
DO42608
UCEC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.0833
p.C261Y
TCGA-DI-A1BU
UCEC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.5976
p.C261Y
DO42023
UCEC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.5976
p.S254C
TCGA-DK-AA77
BLCA
TCGA
PCTSS
DEG_SPOP_SBC_1
0.1667
p.S254C
DO219014
BLCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1667
p.P260S
TCGA-FW-A3R5
SKCM
TCGA
PCTSS
DEG_SPOP_SBC_1
0.6752
p.P260S
DO37406
SKCM
ICGC
PCTSS
DEG_SPOP_SBC_1
0.6752
p.T253M
TCGA-VQ-A94U
STAD
TCGA
PCTSS
DEG_SPOP_SBC_1
0.1389
p.T253M
DO222378
STAD
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1389
p.S254P
DO220896
MELA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with SERTAD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13952
Nuclear transcription factor Y subunit gamma
DEG_SPOP_SBC_1
344:348
PCTSS
SPOP
0.9867
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
260:264
PCTSS
SPOP
0.9248
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1747:1751
PCTSS
SPOP
0.9941
More...
Q15916
Zinc finger and BTB domain-containing protein 6
DEG_SPOP_SBC_1
238:242
PCTSS
SPOP
0.9861
More...
Q86TB3
Alpha-protein kinase 2
DEG_SPOP_SBC_1
1609:1613
PCTSS
SPOP
0.9968
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
1532:1536
PCTSS
SPOP
0.9333
More...
Q96H55
Unconventional myosin-XIX
DEG_SPOP_SBC_1
677:681
PCTSS
SPOP
0.8963
More...
Q9BZ71
Membrane-associated phosphatidylinositol transfer protein 3
DEG_SPOP_SBC_1
81:85
PCTSS
SPOP
0.9091
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
39:43
PCTSS
SPOP
0.9955
More...