DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTSS
Uniprot ID:
Q9BZ71
Source protein:
Membrane-associated phosphatidylinositol transfer protein 3
Source gene:
PITPNM3
Class:
DEG_SPOP_SBC_1
Location:
81:85
E3 ligase:
SPOP
DEGRON score:
0.9091
ASA_SCORE:
58.88
COIL:
0.6876
CONS_SCORE:
0.2725
DSS_SCORE:
0.5706
HELIX:
0.243
FCONS_SCORE:
0.6835
RIG_SCORE:
0.7458
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E89K
TCGA-DA-A1I4
SKCM
TCGA
PCTSS
DEG_SPOP_SBC_1
0.2222
p.E89K
DO37655
SKCM
ICGC
PCTSS
DEG_SPOP_SBC_1
0.2222
p.G78E
TCGA-DF-A2KU
UCEC
TCGA
PCTSS
DEG_SPOP_SBC_1
0.25
p.G78E
DO223286
UCEC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.25
p.P81A
TCGA-HU-A4GQ
STAD
TCGA
PCTSS
DEG_SPOP_SBC_1
0.6392
p.P81A
DO47767
STAD
ICGC
PCTSS
DEG_SPOP_SBC_1
0.6392
p.A80T
DO228483
BRCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO230334
COCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO229013
COCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO229005
COCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO229346
LAML
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO229022
LICA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO230527
LUSC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO231007
LUSC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80T
DO231207
LUSC
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.A80V
DO230315
COCA
ICGC
PCTSS
DEG_SPOP_SBC_1
0.3056
p.P81S
SIDM00789
Colorectal Carcinoma
GDSC
PCTSS
DEG_SPOP_SBC_1
0.6752
p.P81S
ACH-000997
Colon/Colorectal Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.6752
p.P81S
ACH-001061
Colon/Colorectal Cancer
CCLE
PCTSS
DEG_SPOP_SBC_1
0.6752
p.P81S
HCT-15
large_intestine
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.6752
p.L87F
SIDM01205
Acute Myeloid Leukemia
GDSC
PCTSS
DEG_SPOP_SBC_1
0.2778
p.L87F
ACH-002314
Leukemia
CCLE
PCTSS
DEG_SPOP_SBC_1
0.2778
p.L87F
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.2778
p.E81K
TT
thyroid
COSMIC
PCTSS
DEG_SPOP_SBC_1
0.7022
Drug responses associated with PITPNM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13952
Nuclear transcription factor Y subunit gamma
DEG_SPOP_SBC_1
344:348
PCTSS
SPOP
0.9867
More...
Q14140
SERTA domain-containing protein 2
DEG_SPOP_SBC_1
260:264
PCTSS
SPOP
0.9248
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1747:1751
PCTSS
SPOP
0.9941
More...
Q15916
Zinc finger and BTB domain-containing protein 6
DEG_SPOP_SBC_1
238:242
PCTSS
SPOP
0.9861
More...
Q86TB3
Alpha-protein kinase 2
DEG_SPOP_SBC_1
1609:1613
PCTSS
SPOP
0.9968
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
1532:1536
PCTSS
SPOP
0.9333
More...
Q96H55
Unconventional myosin-XIX
DEG_SPOP_SBC_1
677:681
PCTSS
SPOP
0.8963
More...
Q9BZ71
Membrane-associated phosphatidylinositol transfer protein 3
DEG_SPOP_SBC_1
81:85
PCTSS
SPOP
0.9091
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
39:43
PCTSS
SPOP
0.9955
More...