DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPMY
Uniprot ID:
Q9P281
Source protein:
BAH and coiled-coil domain-containing protein 1
Source gene:
BAHCC1
Class:
ITCH
Location:
901:904
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9559
ASA_SCORE:
81.975
COIL:
0.912
CONS_SCORE:
0.2967
DSS_SCORE:
0.4886
HELIX:
0.0465
FCONS_SCORE:
0.8891
RIG_SCORE:
0.6672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G905R
SIDM01004
Chronic Myelogenous Leukemia
GDSC
PPMY
ITCH
0.3056
p.G905R
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
PPMY
ITCH
0.3056
p.A910T
SIDM00723
Non-Small Cell Lung Carcinoma
GDSC
PPMY
ITCH
0.1667
p.A910T
NCI-H2444
lung
COSMIC
PPMY
ITCH
0.1667
p.P902L
SIDM00007
Other Solid Cancers
GDSC
PPMY
ITCH
0.7582
p.P902L
MCC13
skin
COSMIC
PPMY
ITCH
0.7582
p.A891V
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PPMY
ITCH
0.0556
p.G906V
SIDM01031
Esophageal Squamous Cell Carcinoma
GDSC
PPMY
ITCH
0.2778
p.G906V
KYSE-150
oesophagus
COSMIC
PPMY
ITCH
0.2778
Drug responses associated with BAHCC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPMY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13521
Secretogranin-2
ITCH
167:170
PPMY
ITCH,NEDD4
0.519
More...
Q01954
Zinc finger protein basonuclin-1
ITCH
74:77
PPMY
ITCH,NEDD4
0.8829
More...
Q86VH2
Kinesin-like protein KIF27
ITCH
608:611
PPMY
ITCH,NEDD4
0.6139
More...
Q86WA8
Lon protease homolog 2, peroxisomal
ITCH
640:643
PPMY
ITCH,NEDD4
0.768
More...
Q96LT9
RNA-binding region-containing protein 3
ITCH
206:209
PPMY
ITCH,NEDD4
0.9928
More...
Q9HBD1
Roquin-2
ITCH
703:706
PPMY
ITCH,NEDD4
0.9939
More...
Q9HCF6
Transient receptor potential cation channel subfamily M member 3
ITCH
1515:1518
PPMY
ITCH,NEDD4
0.8817
More...
Q9NRJ4
Tubby-related protein 4
ITCH
1241:1244
PPMY
ITCH,NEDD4
0.769
More...
O15255
CAAX box protein 1
ITCH
94:97
PPMY
ITCH,NEDD4
0.956
More...
Q8NA69
Testis-expressed protein 45
ITCH
496:499
PPMY
ITCH,NEDD4
0.9984
More...
Q9P281
BAH and coiled-coil domain-containing protein 1
ITCH
901:904
PPMY
ITCH,NEDD4
0.9559
More...