DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLTSS
Uniprot ID:
O95600
Source protein:
Krueppel-like factor 8
Source gene:
KLF8
Class:
DEG_SPOP_SBC_1
Location:
144:148
E3 ligase:
SPOP
DEGRON score:
0.9812
ASA_SCORE:
80.3
COIL:
0.8676
CONS_SCORE:
0.3441
DSS_SCORE:
0.4492
HELIX:
0.048
FCONS_SCORE:
0.9881
RIG_SCORE:
0.7102
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I156F
TCGA-69-A59K
LUAD
TCGA
VLTSS
DEG_SPOP_SBC_1
0.1111
p.I156F
DO45335
LUAD
ICGC
VLTSS
DEG_SPOP_SBC_1
0.1111
p.P136H
TCGA-EO-A22R
UCEC
TCGA
VLTSS
DEG_SPOP_SBC_1
0.1111
p.P136H
DO42713
UCEC
ICGC
VLTSS
DEG_SPOP_SBC_1
0.1111
p.P136H
SIDM01291
Esophageal Carcinoma
GDSC
VLTSS
DEG_SPOP_SBC_1
0.1111
p.L139M
TCGA-VR-A8EQ
ESCA
TCGA
VLTSS
DEG_SPOP_SBC_1
0.1944
p.I135M
DO222762
COCA
ICGC
VLTSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with KLF8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95600
Krueppel-like factor 8
DEG_SPOP_SBC_1
144:148
VLTSS
SPOP
0.9812
More...
Q5QGS0
Neurite extension and migration factor
DEG_SPOP_SBC_1
862:866
VLTSS
SPOP
0.9973
More...
Q5T7N3
KN motif and ankyrin repeat domain-containing protein 4
DEG_SPOP_SBC_1
486:490
VLTSS
SPOP
0.7879
More...
Q8N2C7
Protein unc-80 homolog
DEG_SPOP_SBC_1
3151:3155
VLTSS
SPOP
0.5821
More...
Q8NCF5
NFATC2-interacting protein
DEG_SPOP_SBC_1
334:338
VLTSS
SPOP
0.9389
More...
Q8TD26
Chromodomain-helicase-DNA-binding protein 6
DEG_SPOP_SBC_1
2129:2133
VLTSS
SPOP
0.9858
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4778:4782
VLTSS
SPOP
0.5936
More...
Q92879
CUGBP Elav-like family member 1
DEG_SPOP_SBC_1
293:297
VLTSS
SPOP
0.8617
More...
Q9Y5T5
Ubiquitin carboxyl-terminal hydrolase 16
DEG_SPOP_SBC_1
548:552
VLTSS
SPOP
0.9998
More...