DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSSS
Uniprot ID:
A8K979
Source protein:
ERI1 exoribonuclease 2
Source gene:
ERI2
Class:
DEG_SPOP_SBC_1
Location:
565:569
E3 ligase:
SPOP
DEGRON score:
0.9149
ASA_SCORE:
81.1
COIL:
0.8502
CONS_SCORE:
0.379
DSS_SCORE:
0.4866
HELIX:
0.1104
FCONS_SCORE:
0.9521
RIG_SCORE:
0.6856
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C578Y
DO51734
COAD
ICGC
VRSSS
DEG_SPOP_SBC_1
0.0833
p.T574K
DO228946
LICA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1944
p.D579E
DO228948
LICA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.0556
p.T564K
DO229031
LICA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.3056
p.P560Q
DO43154
UCEC
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1944
p.I577F
K-562
haematopoietic_and_lymphoid_tissue
COSMIC
VRSSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with ERI2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95819
Mitogen-activated protein kinase kinase kinase kinase 4
DEG_SPOP_SBC_1
706:710
VRSSS
SPOP
0.9811
More...
P01375
Tumor necrosis factor
DEG_SPOP_SBC_1
77:81
VRSSS
SPOP
0.5812
More...
P38159
RNA-binding motif protein, X chromosome
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9851
More...
Q6ZSJ9
Protein shisa-6
DEG_SPOP_SBC_1
248:252
VRSSS
SPOP
0.8915
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1196:1200
VRSSS
SPOP
0.697
More...
Q86VV4
Ran-binding protein 3-like
DEG_SPOP_SBC_1
73:77
VRSSS
SPOP
0.9807
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
18:22
VRSSS
SPOP
0.9843
More...
A8K979
ERI1 exoribonuclease 2
DEG_SPOP_SBC_1
565:569
VRSSS
SPOP
0.9149
More...
Q5VVW2
GTPase-activating Rap/Ran-GAP domain-like protein 3
DEG_SPOP_SBC_1
950:954
VRSSS
SPOP
0.6326
More...
Q96E39
RNA binding motif protein, X-linked-like-1
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9696
More...