DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSSS
Uniprot ID:
Q70CQ4
Source protein:
Ubiquitin carboxyl-terminal hydrolase 31
Source gene:
USP31
Class:
DEG_SPOP_SBC_1
Location:
1196:1200
E3 ligase:
SPOP
DEGRON score:
0.697
ASA_SCORE:
84.12
COIL:
0.607
CONS_SCORE:
0.2522
DSS_SCORE:
0.6978
HELIX:
0.265
FCONS_SCORE:
1.0239
RIG_SCORE:
0.6444
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1193W
TCGA-69-7974
LUAD
TCGA
VRSSS
DEG_SPOP_SBC_1
0.25
p.G1193W
DO23850
LUAD
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.S1208I
TCGA-BR-6452
STAD
TCGA
VRSSS
DEG_SPOP_SBC_1
0.5556
p.S1208I
DO38404
STAD
ICGC
VRSSS
DEG_SPOP_SBC_1
0.5556
p.R1205C
TCGA-D7-A747
STAD
TCGA
VRSSS
DEG_SPOP_SBC_1
0.1944
p.R1205C
DO51735
STAD
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1944
p.S1199F
TCGA-FW-A3R5
SKCM
TCGA
VRSSS
DEG_SPOP_SBC_1
0.7982
p.S1199F
DO37406
SKCM
ICGC
VRSSS
DEG_SPOP_SBC_1
0.7982
p.R1190S
DO229040
LICA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1667
p.S1208N
DO232224
PBCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.5556
p.E1188D
SIDM01503
Small Cell Lung Carcinoma
GDSC
VRSSS
DEG_SPOP_SBC_1
0.1111
p.E1188D
ACH-000844
Lung Cancer
CCLE
VRSSS
DEG_SPOP_SBC_1
0.1111
p.A1192T
ACH-001841
Bile Duct Cancer
CCLE
VRSSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with USP31 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95819
Mitogen-activated protein kinase kinase kinase kinase 4
DEG_SPOP_SBC_1
706:710
VRSSS
SPOP
0.9811
More...
P01375
Tumor necrosis factor
DEG_SPOP_SBC_1
77:81
VRSSS
SPOP
0.5812
More...
P38159
RNA-binding motif protein, X chromosome
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9851
More...
Q6ZSJ9
Protein shisa-6
DEG_SPOP_SBC_1
248:252
VRSSS
SPOP
0.8915
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1196:1200
VRSSS
SPOP
0.697
More...
Q86VV4
Ran-binding protein 3-like
DEG_SPOP_SBC_1
73:77
VRSSS
SPOP
0.9807
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
18:22
VRSSS
SPOP
0.9843
More...
A8K979
ERI1 exoribonuclease 2
DEG_SPOP_SBC_1
565:569
VRSSS
SPOP
0.9149
More...
Q5VVW2
GTPase-activating Rap/Ran-GAP domain-like protein 3
DEG_SPOP_SBC_1
950:954
VRSSS
SPOP
0.6326
More...
Q96E39
RNA binding motif protein, X-linked-like-1
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9696
More...