DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSSS
Uniprot ID:
Q86VV4
Source protein:
Ran-binding protein 3-like
Source gene:
RANBP3L
Class:
DEG_SPOP_SBC_1
Location:
73:77
E3 ligase:
SPOP
DEGRON score:
0.9807
ASA_SCORE:
82.62
COIL:
0.6758
CONS_SCORE:
0.2971
DSS_SCORE:
0.382
HELIX:
0.0586
FCONS_SCORE:
1.0866
RIG_SCORE:
0.7213
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S85Y
TCGA-AX-A2HC
UCEC
TCGA
VRSSS
DEG_SPOP_SBC_1
0.1111
p.S85Y
DO41572
UCEC
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1111
p.G67S
TCGA-D3-A51G
SKCM
TCGA
VRSSS
DEG_SPOP_SBC_1
0.1667
p.G67S
DO47700
SKCM
ICGC
VRSSS
DEG_SPOP_SBC_1
0.1667
p.R74Q
TCGA-EO-A22U
UCEC
TCGA
VRSSS
DEG_SPOP_SBC_1
0.6218
p.R74Q
DO43755
UCEC
ICGC
VRSSS
DEG_SPOP_SBC_1
0.6218
p.R74Q
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
VRSSS
DEG_SPOP_SBC_1
0.6218
p.R74Q
TE-4
oesophagus
COSMIC
VRSSS
DEG_SPOP_SBC_1
0.6218
p.T70R
DO228471
BRCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO230334
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO229010
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO229013
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO229016
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO229003
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO229005
COCA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.T70R
DO231036
LUSC
ICGC
VRSSS
DEG_SPOP_SBC_1
0.25
p.R72S
DO229035
LICA
ICGC
VRSSS
DEG_SPOP_SBC_1
0.3056
p.R74W
SIDM01617
Endometrial Carcinoma
GDSC
VRSSS
DEG_SPOP_SBC_1
0.7523
Drug responses associated with RANBP3L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95819
Mitogen-activated protein kinase kinase kinase kinase 4
DEG_SPOP_SBC_1
706:710
VRSSS
SPOP
0.9811
More...
P01375
Tumor necrosis factor
DEG_SPOP_SBC_1
77:81
VRSSS
SPOP
0.5812
More...
P38159
RNA-binding motif protein, X chromosome
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9851
More...
Q6ZSJ9
Protein shisa-6
DEG_SPOP_SBC_1
248:252
VRSSS
SPOP
0.8915
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1196:1200
VRSSS
SPOP
0.697
More...
Q86VV4
Ran-binding protein 3-like
DEG_SPOP_SBC_1
73:77
VRSSS
SPOP
0.9807
More...
Q9UJD0
Regulating synaptic membrane exocytosis protein 3
DEG_SPOP_SBC_1
18:22
VRSSS
SPOP
0.9843
More...
A8K979
ERI1 exoribonuclease 2
DEG_SPOP_SBC_1
565:569
VRSSS
SPOP
0.9149
More...
Q5VVW2
GTPase-activating Rap/Ran-GAP domain-like protein 3
DEG_SPOP_SBC_1
950:954
VRSSS
SPOP
0.6326
More...
Q96E39
RNA binding motif protein, X-linked-like-1
DEG_SPOP_SBC_1
171:175
VRSSS
SPOP
0.9696
More...