DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSST
Uniprot ID:
A4UGR9
Source protein:
Xin actin-binding repeat-containing protein 2
Source gene:
XIRP2
Class:
DEG_SPOP_SBC_1
Location:
258:262
E3 ligase:
SPOP
DEGRON score:
0.8479
ASA_SCORE:
73.42
COIL:
0.777
CONS_SCORE:
0.4093
DSS_SCORE:
0.521
HELIX:
0.155
FCONS_SCORE:
1.0514
RIG_SCORE:
0.6962
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E263K
TCGA-86-8278
LUAD
TCGA
VTSST
DEG_SPOP_SBC_1
0.3056
p.E263K
DO26308
LUAD
ICGC
VTSST
DEG_SPOP_SBC_1
0.3056
p.A256V
TCGA-99-8025
LUAD
TCGA
VTSST
DEG_SPOP_SBC_1
0.2778
p.A256V
DO24255
LUAD
ICGC
VTSST
DEG_SPOP_SBC_1
0.2778
p.M248V
TCGA-A8-A09Q
BRCA
TCGA
VTSST
DEG_SPOP_SBC_1
0.0556
p.M248V
DO1579
BRCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.0556
p.E265K
TCGA-AX-A2HC
UCEC
TCGA
VTSST
DEG_SPOP_SBC_1
0.25
p.E265K
TCGA-ER-A2NC
SKCM
TCGA
VTSST
DEG_SPOP_SBC_1
0.25
p.E265K
DO47318
SKCM
ICGC
VTSST
DEG_SPOP_SBC_1
0.25
p.E265K
DO41572
UCEC
ICGC
VTSST
DEG_SPOP_SBC_1
0.25
p.R270H
TCGA-AX-A2HC
UCEC
TCGA
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270H
DO41572
UCEC
ICGC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270H
SIDM00007
Other Solid Cancers
GDSC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270H
SIDM00209
Glioblastoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270H
SIDM01490
Small Cell Lung Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.1111
p.I266F
TCGA-EE-A29L
SKCM
TCGA
VTSST
DEG_SPOP_SBC_1
0.2222
p.I266F
DO222599
MELA
ICGC
VTSST
DEG_SPOP_SBC_1
0.2222
p.I266F
DO37835
SKCM
ICGC
VTSST
DEG_SPOP_SBC_1
0.2222
p.P252H
TCGA-NC-A5HQ
LUSC
TCGA
VTSST
DEG_SPOP_SBC_1
0.1667
p.P252H
DO219201
LUSC
ICGC
VTSST
DEG_SPOP_SBC_1
0.1667
p.R270L
TCGA-O2-A52S
LUSC
TCGA
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270L
DO219221
LUSC
ICGC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270L
SIDM00623
Other Blood Cancers
GDSC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270L
Mo-T
haematopoietic_and_lymphoid_tissue
COSMIC
VTSST
DEG_SPOP_SBC_1
0.1111
p.A250T
TCGA-VQ-A8PT
STAD
TCGA
VTSST
DEG_SPOP_SBC_1
0.1111
p.A250T
DO234313
ESAD
ICGC
VTSST
DEG_SPOP_SBC_1
0.1111
p.A250T
DO51776
STAD
ICGC
VTSST
DEG_SPOP_SBC_1
0.1111
p.P252S
DO48393
BLCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.1667
p.P252S
DO229010
COCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.1667
p.P252S
DO229003
COCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.1667
p.P252S
DO229346
LAML
ICGC
VTSST
DEG_SPOP_SBC_1
0.1667
p.K259Q
DO228307
BRCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.6944
p.M248I
DO233728
GACA
ICGC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A250S
DO229027
LICA
ICGC
VTSST
DEG_SPOP_SBC_1
0.1111
p.Q261K
DO224563
LUSC
ICGC
VTSST
DEG_SPOP_SBC_1
0.6944
p.R270C
SIDM00933
Breast Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.1111
p.R270C
CAL-51
breast
COSMIC
VTSST
DEG_SPOP_SBC_1
0.1111
p.A256T
SIDM01061
Oral Cavity Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.2778
p.A256T
HN
upper_aerodigestive_tract
COSMIC
VTSST
DEG_SPOP_SBC_1
0.2778
p.R269H
ACH-000256
Ovarian Cancer
CCLE
VTSST
DEG_SPOP_SBC_1
0.1389
p.V267F
NCI-H1993
lung
COSMIC
VTSST
DEG_SPOP_SBC_1
0.1944
p.T248I
RERF-LC-KJ
lung
COSMIC
VTSST
DEG_SPOP_SBC_1
0.0556
p.D265H
NCI-H2009
lung
COSMIC
VTSST
DEG_SPOP_SBC_1
0.25
p.A261T
RF-48
stomach
COSMIC
VTSST
DEG_SPOP_SBC_1
0.7139
p.S248Y
DU-145
prostate
COSMIC
VTSST
DEG_SPOP_SBC_1
0.0556
p.G266S
H513
pleura
COSMIC
VTSST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with XIRP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
258:262
VTSST
SPOP
0.8479
More...
P35908
Keratin, type II cytoskeletal 2 epidermal
DEG_SPOP_SBC_1
503:507
VTSST
SPOP
0.842
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
303:307
VTSST
SPOP
0.9985
More...
Q06330
Recombining binding protein suppressor of hairless
DEG_SPOP_SBC_1
491:495
VTSST
SPOP
0.9106
More...
Q5T1M5
FK506-binding protein 15
DEG_SPOP_SBC_1
1128:1132
VTSST
SPOP
0.8902
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_SPOP_SBC_1
178:182
VTSST
SPOP
0.8042
More...
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_SPOP_SBC_1
1479:1483
VTSST
SPOP
0.8438
More...
Q9NPG3
Ubinuclein-1
DEG_SPOP_SBC_1
1001:1005
VTSST
SPOP
0.9937
More...
Q9UJM3
ERBB receptor feedback inhibitor 1
DEG_SPOP_SBC_1
305:309
VTSST
SPOP
0.9829
More...