DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSST
Uniprot ID:
Q9NPG3
Source protein:
Ubinuclein-1
Source gene:
UBN1
Class:
DEG_SPOP_SBC_1
Location:
1001:1005
E3 ligase:
SPOP
DEGRON score:
0.9937
ASA_SCORE:
92.94
COIL:
0.9424
CONS_SCORE:
0.2879
DSS_SCORE:
0.4233
HELIX:
0.0312
FCONS_SCORE:
0.9852
RIG_SCORE:
0.6861
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1003L
TCGA-DU-6392
LGG
TCGA
VTSST
DEG_SPOP_SBC_1
0.7667
p.S1003L
DO22237
LGG
ICGC
VTSST
DEG_SPOP_SBC_1
0.7667
p.P991S
TCGA-GN-A4U4
SKCM
TCGA
VTSST
DEG_SPOP_SBC_1
0.0556
p.P991S
DO51256
SKCM
ICGC
VTSST
DEG_SPOP_SBC_1
0.0556
p.V998F
DO228952
LICA
ICGC
VTSST
DEG_SPOP_SBC_1
0.25
p.L1007F
DO228971
LICA
ICGC
VTSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with UBN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
258:262
VTSST
SPOP
0.8479
More...
P35908
Keratin, type II cytoskeletal 2 epidermal
DEG_SPOP_SBC_1
503:507
VTSST
SPOP
0.842
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
303:307
VTSST
SPOP
0.9985
More...
Q06330
Recombining binding protein suppressor of hairless
DEG_SPOP_SBC_1
491:495
VTSST
SPOP
0.9106
More...
Q5T1M5
FK506-binding protein 15
DEG_SPOP_SBC_1
1128:1132
VTSST
SPOP
0.8902
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_SPOP_SBC_1
178:182
VTSST
SPOP
0.8042
More...
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_SPOP_SBC_1
1479:1483
VTSST
SPOP
0.8438
More...
Q9NPG3
Ubinuclein-1
DEG_SPOP_SBC_1
1001:1005
VTSST
SPOP
0.9937
More...
Q9UJM3
ERBB receptor feedback inhibitor 1
DEG_SPOP_SBC_1
305:309
VTSST
SPOP
0.9829
More...