DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSST
Uniprot ID:
P35908
Source protein:
Keratin, type II cytoskeletal 2 epidermal
Source gene:
KRT2
Class:
DEG_SPOP_SBC_1
Location:
503:507
E3 ligase:
SPOP
DEGRON score:
0.842
ASA_SCORE:
69.08
COIL:
0.59
CONS_SCORE:
0.266
DSS_SCORE:
0.3311
HELIX:
0.0128
FCONS_SCORE:
0.8165
RIG_SCORE:
0.7589
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T504K
TCGA-24-1847
OV
TCGA
VTSST
DEG_SPOP_SBC_1
0.6195
p.T504K
DO31080
OV
ICGC
VTSST
DEG_SPOP_SBC_1
0.6195
p.S509L
TCGA-3N-A9WD
SKCM
TCGA
VTSST
DEG_SPOP_SBC_1
0.2778
p.S509L
TCGA-FJ-A3ZE
BLCA
TCGA
VTSST
DEG_SPOP_SBC_1
0.2778
p.S509L
DO484
BLCA
ICGC
VTSST
DEG_SPOP_SBC_1
0.2778
p.S509L
DO51235
SKCM
ICGC
VTSST
DEG_SPOP_SBC_1
0.2778
p.S496R
DO229038
LICA
ICGC
VTSST
DEG_SPOP_SBC_1
0.1389
p.A517G
SIDM00672
Hepatocellular Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A517G
SIDM00882
Breast Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A517G
SIDM00793
Burkitt's Lymphoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A517G
SIDM00808
Burkitt's Lymphoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A517G
SIDM01409
Bladder Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.A517G
SIDM01254
Burkitt's Lymphoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.T500I
SIDM00719
Small Cell Lung Carcinoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.25
p.T500I
ACH-001364
Lung Cancer
CCLE
VTSST
DEG_SPOP_SBC_1
0.25
p.T500I
NCI-H345
lung
COSMIC
VTSST
DEG_SPOP_SBC_1
0.25
p.D494H
SIDM00888
Other Solid Cancers
GDSC
VTSST
DEG_SPOP_SBC_1
0.0833
p.D494H
ACH-000055
Brain Cancer
CCLE
VTSST
DEG_SPOP_SBC_1
0.0833
p.D494H
D-283MED
central_nervous_system
COSMIC
VTSST
DEG_SPOP_SBC_1
0.0833
p.G493E
SIDM00140
Melanoma
GDSC
VTSST
DEG_SPOP_SBC_1
0.0556
p.G493E
ACH-000968
Skin Cancer
CCLE
VTSST
DEG_SPOP_SBC_1
0.0556
p.G493E
COLO-792
skin
COSMIC
VTSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with KRT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
258:262
VTSST
SPOP
0.8479
More...
P35908
Keratin, type II cytoskeletal 2 epidermal
DEG_SPOP_SBC_1
503:507
VTSST
SPOP
0.842
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
303:307
VTSST
SPOP
0.9985
More...
Q06330
Recombining binding protein suppressor of hairless
DEG_SPOP_SBC_1
491:495
VTSST
SPOP
0.9106
More...
Q5T1M5
FK506-binding protein 15
DEG_SPOP_SBC_1
1128:1132
VTSST
SPOP
0.8902
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_SPOP_SBC_1
178:182
VTSST
SPOP
0.8042
More...
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_SPOP_SBC_1
1479:1483
VTSST
SPOP
0.8438
More...
Q9NPG3
Ubinuclein-1
DEG_SPOP_SBC_1
1001:1005
VTSST
SPOP
0.9937
More...
Q9UJM3
ERBB receptor feedback inhibitor 1
DEG_SPOP_SBC_1
305:309
VTSST
SPOP
0.9829
More...