DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
NKENE
Uniprot ID:
P25054
Source protein:
Adenomatous polyposis coli protein
Source gene:
APC
Class:
DEG_APCC_KENBOX_2
Location:
1981:1985
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5172
ASA_SCORE:
126.84
COIL:
0.8796
CONS_SCORE:
0.3597
DSS_SCORE:
0.7988
HELIX:
0.109
FCONS_SCORE:
0.7576
RIG_SCORE:
0.6029
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1971Y
TCGA-AX-A05Z
UCEC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.0556
p.S1971Y
TCGA-D1-A103
UCEC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.0556
p.S1971Y
DO40884
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0556
p.S1971Y
DO42312
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0556
p.E1985K
TCGA-ZF-AA4W
BLCA
TCGA
NKENE
DEG_APCC_KENBOX_2
0.591
p.E1985K
DO219089
BLCA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.591
p.P1993A
SIDM02048
Colorectal Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.1111
p.S1973C
SIDM01108
Non-Small Cell Lung Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.1111
p.S1973C
ACH-000309
Lung Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.1111
p.S1973C
SK-LU-1
lung
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.1111
p.E1991D
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.1667
p.E1991D
ACH-000888
Lung Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.1667
p.E1991D
NCI-H1793
lung
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with APC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_APCC_KENBOX_2
1981:1985
NKENE
APC,CDC20,FZR1
0.5172
More...
P30304
M-phase inducer phosphatase 1
DEG_APCC_KENBOX_2
140:144
NKENE
APC,CDC20,FZR1
0.593
More...
Q14207
Protein NPAT
DEG_APCC_KENBOX_2
1166:1170
NKENE
APC,CDC20,FZR1
0.9827
More...
Q7Z443
Polycystic kidney disease protein 1-like 3
DEG_APCC_KENBOX_2
1225:1229
NKENE
APC,CDC20,FZR1
0.7074
More...
Q9H079
KATNB1-like protein 1
DEG_APCC_KENBOX_2
99:103
NKENE
APC,CDC20,FZR1
0.7472
More...
Q9HAU5
Regulator of nonsense transcripts 2
DEG_APCC_KENBOX_2
1083:1087
NKENE
APC,CDC20,FZR1
0.9955
More...
Q9UHB9
Signal recognition particle subunit SRP68
DEG_APCC_KENBOX_2
38:42
NKENE
APC,CDC20,FZR1
0.7271
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_APCC_KENBOX_2
906:910
NKENE
APC,CDC20,FZR1
0.9736
More...
Q96MH7
Uncharacterized protein C5orf34
DEG_APCC_KENBOX_2
193:197
NKENE
APC,CDC20,FZR1
0.702
More...