DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENE
Uniprot ID:
Q96MH7
Source protein:
Uncharacterized protein C5orf34
Source gene:
C5orf34
Class:
DEG_APCC_KENBOX_2
Location:
193:197
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.702
ASA_SCORE:
97.88
COIL:
0.5684
CONS_SCORE:
0.4581
DSS_SCORE:
0.452
HELIX:
0.3896
FCONS_SCORE:
1.213
RIG_SCORE:
0.7592
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E197K
TCGA-37-3789
LUSC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.591
p.E197K
DO26743
LUSC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.591
p.E197V
TCGA-49-AARE
LUAD
TCGA
NKENE
DEG_APCC_KENBOX_2
0.6582
p.E197V
DO218922
LUAD
ICGC
NKENE
DEG_APCC_KENBOX_2
0.6582
p.K204R
TCGA-B5-A3FA
UCEC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.25
p.K204R
DO52402
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.25
p.L186V
DO222884
COCA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1389
p.K206E
SIDM00882
Breast Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with C5orf34 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_APCC_KENBOX_2
1981:1985
NKENE
APC,CDC20,FZR1
0.5172
More...
P30304
M-phase inducer phosphatase 1
DEG_APCC_KENBOX_2
140:144
NKENE
APC,CDC20,FZR1
0.593
More...
Q14207
Protein NPAT
DEG_APCC_KENBOX_2
1166:1170
NKENE
APC,CDC20,FZR1
0.9827
More...
Q7Z443
Polycystic kidney disease protein 1-like 3
DEG_APCC_KENBOX_2
1225:1229
NKENE
APC,CDC20,FZR1
0.7074
More...
Q9H079
KATNB1-like protein 1
DEG_APCC_KENBOX_2
99:103
NKENE
APC,CDC20,FZR1
0.7472
More...
Q9HAU5
Regulator of nonsense transcripts 2
DEG_APCC_KENBOX_2
1083:1087
NKENE
APC,CDC20,FZR1
0.9955
More...
Q9UHB9
Signal recognition particle subunit SRP68
DEG_APCC_KENBOX_2
38:42
NKENE
APC,CDC20,FZR1
0.7271
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_APCC_KENBOX_2
906:910
NKENE
APC,CDC20,FZR1
0.9736
More...
Q96MH7
Uncharacterized protein C5orf34
DEG_APCC_KENBOX_2
193:197
NKENE
APC,CDC20,FZR1
0.702
More...