DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENE
Uniprot ID:
Q9HCK1
Source protein:
DBF4-type zinc finger-containing protein 2
Source gene:
ZDBF2
Class:
DEG_APCC_KENBOX_2
Location:
906:910
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9736
ASA_SCORE:
115.16
COIL:
0.871
CONS_SCORE:
0.7925
DSS_SCORE:
0.5864
HELIX:
0.1026
FCONS_SCORE:
1.1089
RIG_SCORE:
0.6971
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q901P
TCGA-55-7576
LUAD
TCGA
NKENE
DEG_APCC_KENBOX_2
0.1944
p.Q901P
DO24431
LUAD
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.N909I
TCGA-DM-A1D8
COAD
TCGA
NKENE
DEG_APCC_KENBOX_2
0.728
p.N909I
DO8914
COAD
ICGC
NKENE
DEG_APCC_KENBOX_2
0.728
p.E910K
TCGA-EE-A3AE
SKCM
TCGA
NKENE
DEG_APCC_KENBOX_2
0.591
p.E910K
DO37802
SKCM
ICGC
NKENE
DEG_APCC_KENBOX_2
0.591
p.E910K
SIDM00063
Melanoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.591
p.V902A
DO233748
GACA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.2222
p.D919A
DO220909
MELA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0833
p.D919E
DO220909
MELA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0833
p.D913Y
SIDM00942
Oral Cavity Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.25
p.D913Y
ACH-000518
Head and Neck Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.25
p.D913Y
CAL-33
upper_aerodigestive_tract
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.25
p.E908K
SIDM00140
Melanoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.7022
p.E908K
ACH-000968
Skin Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.7022
p.E908K
COLO-792
skin
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.7022
p.D911Y
CAL-33
upper_aerodigestive_tract
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E906K
COLO-792
skin
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.7022
Drug responses associated with ZDBF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_APCC_KENBOX_2
1981:1985
NKENE
APC,CDC20,FZR1
0.5172
More...
P30304
M-phase inducer phosphatase 1
DEG_APCC_KENBOX_2
140:144
NKENE
APC,CDC20,FZR1
0.593
More...
Q14207
Protein NPAT
DEG_APCC_KENBOX_2
1166:1170
NKENE
APC,CDC20,FZR1
0.9827
More...
Q7Z443
Polycystic kidney disease protein 1-like 3
DEG_APCC_KENBOX_2
1225:1229
NKENE
APC,CDC20,FZR1
0.7074
More...
Q9H079
KATNB1-like protein 1
DEG_APCC_KENBOX_2
99:103
NKENE
APC,CDC20,FZR1
0.7472
More...
Q9HAU5
Regulator of nonsense transcripts 2
DEG_APCC_KENBOX_2
1083:1087
NKENE
APC,CDC20,FZR1
0.9955
More...
Q9UHB9
Signal recognition particle subunit SRP68
DEG_APCC_KENBOX_2
38:42
NKENE
APC,CDC20,FZR1
0.7271
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_APCC_KENBOX_2
906:910
NKENE
APC,CDC20,FZR1
0.9736
More...
Q96MH7
Uncharacterized protein C5orf34
DEG_APCC_KENBOX_2
193:197
NKENE
APC,CDC20,FZR1
0.702
More...