DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENE
Uniprot ID:
Q9UHB9
Source protein:
Signal recognition particle subunit SRP68
Source gene:
SRP68
Class:
DEG_APCC_KENBOX_2
Location:
38:42
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7271
ASA_SCORE:
106.16
COIL:
0.7562
CONS_SCORE:
0.2258
DSS_SCORE:
0.734
HELIX:
0.2036
FCONS_SCORE:
1.0806
RIG_SCORE:
0.6363
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G47R
TCGA-A5-A0G2
UCEC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47R
TCGA-AD-6964
COAD
TCGA
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47R
TCGA-QK-A8Z7
HNSC
TCGA
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47R
DO8360
COAD
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47R
DO52096
HNSC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47R
DO41235
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.S45L
TCGA-A8-A08H
BRCA
TCGA
NKENE
DEG_APCC_KENBOX_2
0.25
p.S45L
DO5563
BRCA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.25
p.E40G
TCGA-D8-A147
BRCA
TCGA
NKENE
DEG_APCC_KENBOX_2
0.7199
p.E40G
DO4347
BRCA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.7199
p.R49Q
DO48566
BLCA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.5833
p.R49Q
DO37146
READ
ICGC
NKENE
DEG_APCC_KENBOX_2
0.5833
p.T51A
DO223732
CESC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0833
p.S50P
DO7780
COAD
ICGC
NKENE
DEG_APCC_KENBOX_2
0.1111
p.E36G
DO233266
GACA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.2778
p.E36G
DO233192
GACA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.2778
p.M28R
DO22237
LGG
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0556
p.Q38K
DO229032
LICA
ICGC
NKENE
DEG_APCC_KENBOX_2
0.6944
p.R51Q
DO43306
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0833
p.R51Q
DO41572
UCEC
ICGC
NKENE
DEG_APCC_KENBOX_2
0.0833
p.E36V
SIDM00769
Non-Small Cell Lung Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.2778
p.E36V
NCI-H1838
lung
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.2778
p.G47A
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47A
ACH-000893
Lung Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.1944
p.G47A
NCI-H1651
lung
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.1944
p.E37V
SIDM01190
Bladder Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E37V
ACH-000720
Bladder Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E37V
TCCSUP
urinary_tract
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E37K
SIDM01190
Bladder Carcinoma
GDSC
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E37K
ACH-000720
Bladder Cancer
CCLE
NKENE
DEG_APCC_KENBOX_2
0.3056
p.E37K
TCCSUP
urinary_tract
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.3056
p.S50L
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.1111
p.G50W
NCI-H250
lung
COSMIC
NKENE
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with SRP68 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25054
Adenomatous polyposis coli protein
DEG_APCC_KENBOX_2
1981:1985
NKENE
APC,CDC20,FZR1
0.5172
More...
P30304
M-phase inducer phosphatase 1
DEG_APCC_KENBOX_2
140:144
NKENE
APC,CDC20,FZR1
0.593
More...
Q14207
Protein NPAT
DEG_APCC_KENBOX_2
1166:1170
NKENE
APC,CDC20,FZR1
0.9827
More...
Q7Z443
Polycystic kidney disease protein 1-like 3
DEG_APCC_KENBOX_2
1225:1229
NKENE
APC,CDC20,FZR1
0.7074
More...
Q9H079
KATNB1-like protein 1
DEG_APCC_KENBOX_2
99:103
NKENE
APC,CDC20,FZR1
0.7472
More...
Q9HAU5
Regulator of nonsense transcripts 2
DEG_APCC_KENBOX_2
1083:1087
NKENE
APC,CDC20,FZR1
0.9955
More...
Q9UHB9
Signal recognition particle subunit SRP68
DEG_APCC_KENBOX_2
38:42
NKENE
APC,CDC20,FZR1
0.7271
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_APCC_KENBOX_2
906:910
NKENE
APC,CDC20,FZR1
0.9736
More...
Q96MH7
Uncharacterized protein C5orf34
DEG_APCC_KENBOX_2
193:197
NKENE
APC,CDC20,FZR1
0.702
More...