DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PISTS
Uniprot ID:
O94855
Source protein:
Protein transport protein Sec24D
Source gene:
SEC24D
Class:
DEG_SPOP_SBC_1
Location:
111:115
E3 ligase:
SPOP
DEGRON score:
0.9483
ASA_SCORE:
82.2
COIL:
0.953
CONS_SCORE:
0.264
DSS_SCORE:
0.5819
HELIX:
0.023
FCONS_SCORE:
0.9645
RIG_SCORE:
0.6456
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S125I
TCGA-AP-A051
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.0556
p.S107Y
TCGA-B5-A0JY
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.2222
p.S107Y
DO43041
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.P109Q
DO228985
LICA
ICGC
PISTS
DEG_SPOP_SBC_1
0.2778
p.S115L
DO220899
MELA
ICGC
PISTS
DEG_SPOP_SBC_1
0.7667
p.S106T
DO232761
PBCA
ICGC
PISTS
DEG_SPOP_SBC_1
0.1944
p.T111A
ACH-000969
Colon/Colorectal Cancer
CCLE
PISTS
DEG_SPOP_SBC_1
0.7139
Drug responses associated with SEC24D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94855
Protein transport protein Sec24D
DEG_SPOP_SBC_1
111:115
PISTS
SPOP
0.9483
More...
P33981
Dual specificity protein kinase TTK
DEG_SPOP_SBC_1
438:442
PISTS
SPOP
0.9975
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
81:85
PISTS
SPOP
0.9924
More...
Q15762
CD226 antigen
DEG_SPOP_SBC_1
303:307
PISTS
SPOP
0.9768
More...
Q69YQ0
Cytospin-A
DEG_SPOP_SBC_1
891:895
PISTS
SPOP
0.9968
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_SPOP_SBC_1
605:609
PISTS
SPOP
0.9332
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
682:686
PISTS
SPOP
0.7746
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
428:432
PISTS
SPOP
0.9122
More...
Q9Y5G3
Protocadherin gamma-B1
DEG_SPOP_SBC_1
282:286
PISTS
SPOP
0.9253
More...
Q96P64
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4
DEG_SPOP_SBC_1
331:335
PISTS
SPOP
0.9932
More...