DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PISTS
Uniprot ID:
Q13428
Source protein:
Treacle protein
Source gene:
TCOF1
Class:
DEG_SPOP_SBC_1
Location:
81:85
E3 ligase:
SPOP
DEGRON score:
0.9924
ASA_SCORE:
92.6
COIL:
0.9378
CONS_SCORE:
0.8859
DSS_SCORE:
0.6896
HELIX:
0.0308
FCONS_SCORE:
1.2022
RIG_SCORE:
0.5971
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R77L
TCGA-CJ-4899
KIRC
TCGA
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77L
DO16233
KIRC
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77C
TCGA-E6-A1LX
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77C
DO42304
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77C
DO41020
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.E89K
TCGA-EE-A2A1
SKCM
TCGA
PISTS
DEG_SPOP_SBC_1
0.2222
p.E89K
DO38045
SKCM
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.E91K
DO227916
BRCA
ICGC
PISTS
DEG_SPOP_SBC_1
0.1667
p.S88L
DO222762
COCA
ICGC
PISTS
DEG_SPOP_SBC_1
0.6944
p.V78L
DO229015
LICA
ICGC
PISTS
DEG_SPOP_SBC_1
0.25
p.T76P
DO228253
MALY
ICGC
PISTS
DEG_SPOP_SBC_1
0.1944
p.S85L
SIDM00040
Gastric Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.8778
p.S85L
ACH-002202
Gastric Cancer
CCLE
PISTS
DEG_SPOP_SBC_1
0.8778
p.S85L
TMK-1
stomach
COSMIC
PISTS
DEG_SPOP_SBC_1
0.8778
p.R77H
SIDM00819
Kidney Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77H
ACH-002189
Kidney Cancer
CCLE
PISTS
DEG_SPOP_SBC_1
0.2222
p.R77H
RCC-FG2
kidney
COSMIC
PISTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with TCOF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94855
Protein transport protein Sec24D
DEG_SPOP_SBC_1
111:115
PISTS
SPOP
0.9483
More...
P33981
Dual specificity protein kinase TTK
DEG_SPOP_SBC_1
438:442
PISTS
SPOP
0.9975
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
81:85
PISTS
SPOP
0.9924
More...
Q15762
CD226 antigen
DEG_SPOP_SBC_1
303:307
PISTS
SPOP
0.9768
More...
Q69YQ0
Cytospin-A
DEG_SPOP_SBC_1
891:895
PISTS
SPOP
0.9968
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_SPOP_SBC_1
605:609
PISTS
SPOP
0.9332
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
682:686
PISTS
SPOP
0.7746
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
428:432
PISTS
SPOP
0.9122
More...
Q9Y5G3
Protocadherin gamma-B1
DEG_SPOP_SBC_1
282:286
PISTS
SPOP
0.9253
More...
Q96P64
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4
DEG_SPOP_SBC_1
331:335
PISTS
SPOP
0.9932
More...