DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PISTS
Uniprot ID:
Q9Y5G3
Source protein:
Protocadherin gamma-B1
Source gene:
PCDHGB1
Class:
DEG_SPOP_SBC_1
Location:
282:286
E3 ligase:
SPOP
DEGRON score:
0.9253
ASA_SCORE:
79.1
COIL:
0.7324
CONS_SCORE:
0.3777
DSS_SCORE:
0.1881
HELIX:
0.108
FCONS_SCORE:
0.6504
RIG_SCORE:
0.7896
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A272T
TCGA-50-5944
LUAD
TCGA
PISTS
DEG_SPOP_SBC_1
0.0556
p.A272T
DO24379
LUAD
ICGC
PISTS
DEG_SPOP_SBC_1
0.0556
p.S286R
TCGA-55-8089
LUAD
TCGA
PISTS
DEG_SPOP_SBC_1
0.7427
p.S286R
DO23690
LUAD
ICGC
PISTS
DEG_SPOP_SBC_1
0.7427
p.T294N
TCGA-A5-A0G1
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.1111
p.T294N
DO42472
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.1111
p.D296N
TCGA-AA-A010
COAD
TCGA
PISTS
DEG_SPOP_SBC_1
0.0556
p.D296N
TCGA-EO-A3B0
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.0556
p.D296N
DO222815
BTCA
ICGC
PISTS
DEG_SPOP_SBC_1
0.0556
p.D296N
DO219773
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.0556
p.T285I
TCGA-AX-A2HD
UCEC
TCGA
PISTS
DEG_SPOP_SBC_1
0.7078
p.T285I
DO42608
UCEC
ICGC
PISTS
DEG_SPOP_SBC_1
0.7078
p.T275A
TCGA-BR-6452
STAD
TCGA
PISTS
DEG_SPOP_SBC_1
0.1389
p.T275A
DO38404
STAD
ICGC
PISTS
DEG_SPOP_SBC_1
0.1389
p.T275I
TCGA-EB-A44N
SKCM
TCGA
PISTS
DEG_SPOP_SBC_1
0.1389
p.T275I
DO47638
SKCM
ICGC
PISTS
DEG_SPOP_SBC_1
0.1389
p.L290F
DO8264
COAD
ICGC
PISTS
DEG_SPOP_SBC_1
0.2222
p.S284C
DO222739
ESCA
ICGC
PISTS
DEG_SPOP_SBC_1
0.7541
p.A272V
SIDM00403
T-Lymphoblastic Leukemia
GDSC
PISTS
DEG_SPOP_SBC_1
0.0556
p.A272V
ACH-000636
Leukemia
CCLE
PISTS
DEG_SPOP_SBC_1
0.0556
p.A272V
RPMI-8402
haematopoietic_and_lymphoid_tissue
COSMIC
PISTS
DEG_SPOP_SBC_1
0.0556
p.I283V
SIDM00570
Gastric Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00961
Ewing's Sarcoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00403
T-Lymphoblastic Leukemia
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00577
Neuroblastoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00231
Kidney Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00354
Squamous Cell Lung Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00596
Endometrial Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00026
Other Solid Cancers
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM00168
Head and Neck Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.I283V
SIDM01619
Endometrial Carcinoma
GDSC
PISTS
DEG_SPOP_SBC_1
0.5965
p.F278S
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
PISTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PCDHGB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94855
Protein transport protein Sec24D
DEG_SPOP_SBC_1
111:115
PISTS
SPOP
0.9483
More...
P33981
Dual specificity protein kinase TTK
DEG_SPOP_SBC_1
438:442
PISTS
SPOP
0.9975
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
81:85
PISTS
SPOP
0.9924
More...
Q15762
CD226 antigen
DEG_SPOP_SBC_1
303:307
PISTS
SPOP
0.9768
More...
Q69YQ0
Cytospin-A
DEG_SPOP_SBC_1
891:895
PISTS
SPOP
0.9968
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_SPOP_SBC_1
605:609
PISTS
SPOP
0.9332
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
682:686
PISTS
SPOP
0.7746
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
428:432
PISTS
SPOP
0.9122
More...
Q9Y5G3
Protocadherin gamma-B1
DEG_SPOP_SBC_1
282:286
PISTS
SPOP
0.9253
More...
Q96P64
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4
DEG_SPOP_SBC_1
331:335
PISTS
SPOP
0.9932
More...