DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKENK
Uniprot ID:
P13521
Source protein:
Secretogranin-2
Source gene:
SCG2
Class:
DEG_APCC_KENBOX_2
Location:
129:133
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5373
ASA_SCORE:
112.22
COIL:
0.8664
CONS_SCORE:
0.5975
DSS_SCORE:
0.6897
HELIX:
0.1068
FCONS_SCORE:
1
RIG_SCORE:
0.6322
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K141N
TCGA-AJ-A3EL
UCEC
TCGA
PKENK
DEG_APCC_KENBOX_2
0.2222
p.K141N
TCGA-EO-A22X
UCEC
TCGA
PKENK
DEG_APCC_KENBOX_2
0.2222
p.K141N
DO41542
UCEC
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.K141N
DO43907
UCEC
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.P129L
TCGA-BP-5178
KIRC
TCGA
PKENK
DEG_APCC_KENBOX_2
0.6471
p.P129L
DO18582
KIRC
ICGC
PKENK
DEG_APCC_KENBOX_2
0.6471
p.L137F
TCGA-DF-A2KV
UCEC
TCGA
PKENK
DEG_APCC_KENBOX_2
0.2222
p.L137F
TCGA-FB-AAPP
PAAD
TCGA
PKENK
DEG_APCC_KENBOX_2
0.2222
p.L137F
DO218963
PAAD
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.L137F
DO219771
UCEC
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.P129S
TCGA-UY-A8OB
BLCA
TCGA
PKENK
DEG_APCC_KENBOX_2
0.5641
p.P129S
DO219037
BLCA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.5641
p.K141T
DO233937
GACA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.P125H
DO228974
LICA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.P125L
DO222578
MELA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2222
p.E124D
SIDM00645
Non-Small Cell Lung Carcinoma
GDSC
PKENK
DEG_APCC_KENBOX_2
0.1944
p.E124D
NCI-H1355
lung
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.1944
p.A136V
SIDM00498
Colorectal Carcinoma
GDSC
PKENK
DEG_APCC_KENBOX_2
0.25
p.A136V
ACH-000970
Colon/Colorectal Cancer
CCLE
PKENK
DEG_APCC_KENBOX_2
0.25
p.A136V
SNU-C5
large_intestine
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.25
p.P134L
ACH-000774
Lung Cancer
CCLE
PKENK
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with SCG2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_KENBOX_2
98:102
PKENK
APC,CDC20,FZR1
0.5471
More...
P13521
Secretogranin-2
DEG_APCC_KENBOX_2
129:133
PKENK
APC,CDC20,FZR1
0.5373
More...
P14902
Indoleamine 2,3-dioxygenase 1
DEG_APCC_KENBOX_2
362:366
PKENK
APC,CDC20,FZR1
0.5041
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
373:377
PKENK
APC,CDC20,FZR1
0.8238
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
399:403
PKENK
APC,CDC20,FZR1
0.689
More...
P42568
Protein AF-9
DEG_APCC_KENBOX_2
236:240
PKENK
APC,CDC20,FZR1
0.9558
More...
Q5H9J7
Protein BEX5
DEG_APCC_KENBOX_2
5:9
PKENK
APC,CDC20,FZR1
0.6674
More...
Q8WWQ0
PH-interacting protein
DEG_APCC_KENBOX_2
763:767
PKENK
APC,CDC20,FZR1
0.8724
More...
Q96S96
Phosphatidylethanolamine-binding protein 4
DEG_APCC_KENBOX_2
166:170
PKENK
APC,CDC20,FZR1
0.761
More...
Q8IZ63
Proline-rich protein 22
DEG_APCC_KENBOX_2
188:192
PKENK
APC,CDC20,FZR1
0.9074
More...