DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PKENK
Uniprot ID:
Q96S96
Source protein:
Phosphatidylethanolamine-binding protein 4
Source gene:
PEBP4
Class:
DEG_APCC_KENBOX_2
Location:
166:170
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.761
ASA_SCORE:
113.74
COIL:
0.8636
CONS_SCORE:
0.4184
DSS_SCORE:
0.3292
HELIX:
0.0938
FCONS_SCORE:
0.951
RIG_SCORE:
0.7786
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M177I
TCGA-05-4396
LUAD
TCGA
PKENK
DEG_APCC_KENBOX_2
0.1389
p.M177I
TCGA-EE-A183
SKCM
TCGA
PKENK
DEG_APCC_KENBOX_2
0.1389
p.M177I
DO23838
LUAD
ICGC
PKENK
DEG_APCC_KENBOX_2
0.1389
p.M177I
DO37715
SKCM
ICGC
PKENK
DEG_APCC_KENBOX_2
0.1389
p.Q157H
TCGA-5L-AAT1
BRCA
TCGA
PKENK
DEG_APCC_KENBOX_2
0.0833
p.Q157H
DO219594
BRCA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.0833
p.P166H
TCGA-D3-A2JP
SKCM
TCGA
PKENK
DEG_APCC_KENBOX_2
0.6583
p.P166H
DO47407
SKCM
ICGC
PKENK
DEG_APCC_KENBOX_2
0.6583
p.E168K
TCGA-EE-A17Y
SKCM
TCGA
PKENK
DEG_APCC_KENBOX_2
0.7022
p.E168K
TCGA-EE-A2GO
SKCM
TCGA
PKENK
DEG_APCC_KENBOX_2
0.7022
p.E168K
DO37823
SKCM
ICGC
PKENK
DEG_APCC_KENBOX_2
0.7022
p.E168K
DO47459
SKCM
ICGC
PKENK
DEG_APCC_KENBOX_2
0.7022
p.S163C
DO233134
GACA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.25
p.L156R
DO233748
GACA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.0556
p.R172G
DO51014
LAML
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2778
p.D178E
DO229008
LICA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.1111
p.R172Q
SIDM00360
Other Solid Cancers
GDSC
PKENK
DEG_APCC_KENBOX_2
0.2778
p.R172Q
ACH-000347
Pancreatic Cancer
CCLE
PKENK
DEG_APCC_KENBOX_2
0.2778
p.R172Q
QGP-1
pancreas
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with PEBP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_KENBOX_2
98:102
PKENK
APC,CDC20,FZR1
0.5471
More...
P13521
Secretogranin-2
DEG_APCC_KENBOX_2
129:133
PKENK
APC,CDC20,FZR1
0.5373
More...
P14902
Indoleamine 2,3-dioxygenase 1
DEG_APCC_KENBOX_2
362:366
PKENK
APC,CDC20,FZR1
0.5041
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
373:377
PKENK
APC,CDC20,FZR1
0.8238
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
399:403
PKENK
APC,CDC20,FZR1
0.689
More...
P42568
Protein AF-9
DEG_APCC_KENBOX_2
236:240
PKENK
APC,CDC20,FZR1
0.9558
More...
Q5H9J7
Protein BEX5
DEG_APCC_KENBOX_2
5:9
PKENK
APC,CDC20,FZR1
0.6674
More...
Q8WWQ0
PH-interacting protein
DEG_APCC_KENBOX_2
763:767
PKENK
APC,CDC20,FZR1
0.8724
More...
Q96S96
Phosphatidylethanolamine-binding protein 4
DEG_APCC_KENBOX_2
166:170
PKENK
APC,CDC20,FZR1
0.761
More...
Q8IZ63
Proline-rich protein 22
DEG_APCC_KENBOX_2
188:192
PKENK
APC,CDC20,FZR1
0.9074
More...