DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKENK
Uniprot ID:
P27816
Source protein:
Microtubule-associated protein 4
Source gene:
MAP4
Class:
DEG_APCC_KENBOX_2
Location:
399:403
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.689
ASA_SCORE:
119.98
COIL:
0.8692
CONS_SCORE:
0.5249
DSS_SCORE:
0.5482
HELIX:
0.0624
FCONS_SCORE:
0.9782
RIG_SCORE:
0.6799
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V411A
TCGA-BR-7707
STAD
TCGA
PKENK
DEG_APCC_KENBOX_2
0.1111
p.V411A
DO38487
STAD
ICGC
PKENK
DEG_APCC_KENBOX_2
0.1111
p.K399E
DO8264
COAD
ICGC
PKENK
DEG_APCC_KENBOX_2
0.7022
p.S405N
DO228935
COCA
ICGC
PKENK
DEG_APCC_KENBOX_2
0.2778
p.E391G
DO220124
SARC
ICGC
PKENK
DEG_APCC_KENBOX_2
0.1111
p.A401T
DO38192
STAD
ICGC
PKENK
DEG_APCC_KENBOX_2
0.7139
p.S393F
SIDM00007
Other Solid Cancers
GDSC
PKENK
DEG_APCC_KENBOX_2
0.6111
p.S393F
MCC13
skin
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.6111
p.P402L
ACH-000882
Skin Cancer
CCLE
PKENK
DEG_APCC_KENBOX_2
0.7582
p.P402L
IGR-1
skin
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.7582
p.S410F
ACH-001550
Skin Cancer
CCLE
PKENK
DEG_APCC_KENBOX_2
0.1389
p.S410F
MCC13
skin
COSMIC
PKENK
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with MAP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_APCC_KENBOX_2
98:102
PKENK
APC,CDC20,FZR1
0.5471
More...
P13521
Secretogranin-2
DEG_APCC_KENBOX_2
129:133
PKENK
APC,CDC20,FZR1
0.5373
More...
P14902
Indoleamine 2,3-dioxygenase 1
DEG_APCC_KENBOX_2
362:366
PKENK
APC,CDC20,FZR1
0.5041
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
373:377
PKENK
APC,CDC20,FZR1
0.8238
More...
P27816
Microtubule-associated protein 4
DEG_APCC_KENBOX_2
399:403
PKENK
APC,CDC20,FZR1
0.689
More...
P42568
Protein AF-9
DEG_APCC_KENBOX_2
236:240
PKENK
APC,CDC20,FZR1
0.9558
More...
Q5H9J7
Protein BEX5
DEG_APCC_KENBOX_2
5:9
PKENK
APC,CDC20,FZR1
0.6674
More...
Q8WWQ0
PH-interacting protein
DEG_APCC_KENBOX_2
763:767
PKENK
APC,CDC20,FZR1
0.8724
More...
Q96S96
Phosphatidylethanolamine-binding protein 4
DEG_APCC_KENBOX_2
166:170
PKENK
APC,CDC20,FZR1
0.761
More...
Q8IZ63
Proline-rich protein 22
DEG_APCC_KENBOX_2
188:192
PKENK
APC,CDC20,FZR1
0.9074
More...