DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTST
Uniprot ID:
Q15648
Source protein:
Mediator of RNA polymerase II transcription subunit 1
Source gene:
MED1
Class:
DEG_SPOP_SBC_1
Location:
1033:1037
E3 ligase:
SPOP
DEGRON score:
0.9764
ASA_SCORE:
93.84
COIL:
0.9616
CONS_SCORE:
0.3752
DSS_SCORE:
0.8046
HELIX:
0.0124
FCONS_SCORE:
0.9696
RIG_SCORE:
0.4953
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H1024Y
TCGA-B5-A11E
UCEC
TCGA
PPTST
DEG_SPOP_SBC_1
0.0833
p.H1024Y
DO41644
UCEC
ICGC
PPTST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with MED1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60292
Signal-induced proliferation-associated 1-like protein 3
DEG_SPOP_SBC_1
125:129
PPTST
SPOP
0.9194
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
2076:2080
PPTST
SPOP
0.9939
More...
O96018
Amyloid-beta A4 precursor protein-binding family A member 3
DEG_SPOP_SBC_1
237:241
PPTST
SPOP
0.6594
More...
Q00613
Heat shock factor protein 1
DEG_SPOP_SBC_1
365:369
PPTST
SPOP
0.9967
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1549:1553
PPTST
SPOP
0.816
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1628:1632
PPTST
SPOP
0.7158
More...
Q15648
Mediator of RNA polymerase II transcription subunit 1
DEG_SPOP_SBC_1
1033:1037
PPTST
SPOP
0.9764
More...
Q96D71
RalBP1-associated Eps domain-containing protein 1
DEG_SPOP_SBC_1
237:241
PPTST
SPOP
0.9554
More...
Q9UKZ4
Teneurin-1
DEG_SPOP_SBC_1
234:238
PPTST
SPOP
0.9932
More...
Q9P2V4
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
DEG_SPOP_SBC_1
348:352
PPTST
SPOP
0.7735
More...
C9JQL5
Putative dispanin subfamily A member 2d
DEG_SPOP_SBC_1
40:44
PPTST
SPOP
0.6181
More...
Q96N23
Cilia- and flagella-associated protein 54
DEG_SPOP_SBC_1
25:29
PPTST
SPOP
0.9906
More...