DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTT
Uniprot ID:
Q9NP99
Source protein:
Triggering receptor expressed on myeloid cells 1
Source gene:
TREM1
Class:
DEG_SPOP_SBC_1
Location:
155:159
E3 ligase:
SPOP
DEGRON score:
0.9954
ASA_SCORE:
85.4
COIL:
0.9154
CONS_SCORE:
0.5752
DSS_SCORE:
0.4251
HELIX:
0.0204
FCONS_SCORE:
1.3815
RIG_SCORE:
0.7729
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P155S
TCGA-AO-A03P
BRCA
TCGA
PPTTT
DEG_SPOP_SBC_1
0.6752
p.P155S
DO5633
BRCA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.6752
p.P155S
DO222837
MELA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.6752
p.K160E
TCGA-AX-A0J0
UCEC
TCGA
PPTTT
DEG_SPOP_SBC_1
0.3056
p.K160E
DO41133
UCEC
ICGC
PPTTT
DEG_SPOP_SBC_1
0.3056
p.E145D
TCGA-BS-A0UF
UCEC
TCGA
PPTTT
DEG_SPOP_SBC_1
0.0556
p.E145D
DO41488
UCEC
ICGC
PPTTT
DEG_SPOP_SBC_1
0.0556
p.K160N
TCGA-EE-A183
SKCM
TCGA
PPTTT
DEG_SPOP_SBC_1
0.3056
p.K160N
DO37715
SKCM
ICGC
PPTTT
DEG_SPOP_SBC_1
0.3056
p.Y166F
DO228278
LICA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.T148I
DO222837
MELA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.T158S
SIDM00722
Mesothelioma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.6005
p.T158S
ACH-000092
Lung Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.6005
p.T158S
NCI-H2452
pleura
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.6005
p.P169A
SIDM00002
Neuroblastoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.0556
p.P169A
ACH-002340
Neuroblastoma
CCLE
PPTTT
DEG_SPOP_SBC_1
0.0556
p.P169A
NBsusSR
autonomic_ganglia
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.0556
p.T159S
SIDM00702
Non-Small Cell Lung Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.6005
p.T159S
ACH-000311
Lung Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.6005
p.T159S
NCI-H2122
lung
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.6005
p.P164T
SIDM00049
Colorectal Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.1944
p.P164T
ACH-002233
Colon/Colorectal Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.1944
p.P164T
DIFI
large_intestine
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with TREM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
410:414
PPTTT
SPOP
0.9659
More...
P06127
T-cell surface glycoprotein CD5
DEG_SPOP_SBC_1
146:150
PPTTT
SPOP
0.7038
More...
P14780
Matrix metalloproteinase-9
DEG_SPOP_SBC_1
453:457
PPTTT
SPOP
0.9889
More...
P49336
Cyclin-dependent kinase 8
DEG_SPOP_SBC_1
408:412
PPTTT
SPOP
0.9916
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1401:1405
PPTTT
SPOP
0.6712
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1417:1421
PPTTT
SPOP
0.7768
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1424:1428
PPTTT
SPOP
0.5001
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1433:1437
PPTTT
SPOP
0.9489
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1472:1476
PPTTT
SPOP
0.5727
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1518:1522
PPTTT
SPOP
0.6668
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1534:1538
PPTTT
SPOP
0.875
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1541:1545
PPTTT
SPOP
0.8682
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1557:1561
PPTTT
SPOP
0.9028
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1573:1577
PPTTT
SPOP
0.6471
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1613:1617
PPTTT
SPOP
0.6161
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1620:1624
PPTTT
SPOP
0.9877
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1636:1640
PPTTT
SPOP
0.8931
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1644:1648
PPTTT
SPOP
0.6445
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1676:1680
PPTTT
SPOP
0.8968
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1691:1695
PPTTT
SPOP
0.728
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1748:1752
PPTTT
SPOP
0.7782
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1895:1899
PPTTT
SPOP
0.5416
More...
Q13332
Receptor-type tyrosine-protein phosphatase S
DEG_SPOP_SBC_1
675:679
PPTTT
SPOP
0.9953
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
419:423
PPTTT
SPOP
0.9988
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1446:1450
PPTTT
SPOP
0.9943
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1572:1576
PPTTT
SPOP
0.9457
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
641:645
PPTTT
SPOP
0.9938
More...
Q76M96
Coiled-coil domain-containing protein 80
DEG_SPOP_SBC_1
396:400
PPTTT
SPOP
0.9674
More...
Q8N307
Mucin-20
DEG_SPOP_SBC_1
611:615
PPTTT
SPOP
0.92
More...
Q8TEQ8
GPI ethanolamine phosphate transferase 3
DEG_SPOP_SBC_1
127:131
PPTTT
SPOP
0.564
More...
Q9NP99
Triggering receptor expressed on myeloid cells 1
DEG_SPOP_SBC_1
155:159
PPTTT
SPOP
0.9954
More...
Q9NQS3
Nectin-3
DEG_SPOP_SBC_1
358:362
PPTTT
SPOP
0.9785
More...
Q9NXL9
DNA helicase MCM9
DEG_SPOP_SBC_1
1089:1093
PPTTT
SPOP
0.6174
More...
Q9NYY3
Serine/threonine-protein kinase PLK2
DEG_SPOP_SBC_1
422:426
PPTTT
SPOP
0.8683
More...
P43366
Melanoma-associated antigen B1
DEG_SPOP_SBC_1
65:69
PPTTT
SPOP
0.991
More...
A1L1A6
Immunoglobulin superfamily member 23
DEG_SPOP_SBC_1
19:23
PPTTT
SPOP
0.989
More...