DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTT
Uniprot ID:
Q9NYY3
Source protein:
Serine/threonine-protein kinase PLK2
Source gene:
PLK2
Class:
DEG_SPOP_SBC_1
Location:
422:426
E3 ligase:
SPOP
DEGRON score:
0.8683
ASA_SCORE:
89.32
COIL:
0.899
CONS_SCORE:
0.3192
DSS_SCORE:
0.7077
HELIX:
0.0674
FCONS_SCORE:
1.1309
RIG_SCORE:
0.6765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A428T
TCGA-A5-A0G1
UCEC
TCGA
PPTTT
DEG_SPOP_SBC_1
0.2778
p.A428T
DO42472
UCEC
ICGC
PPTTT
DEG_SPOP_SBC_1
0.2778
p.S430F
TCGA-ET-A39O
THCA
TCGA
PPTTT
DEG_SPOP_SBC_1
0.2222
p.S430F
DO39874
THCA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.2222
p.V435I
SIDM01685
B-Lymphoblastic Leukemia
GDSC
PPTTT
DEG_SPOP_SBC_1
0.0833
p.V427I
ACH-001737
Leukemia
CCLE
PPTTT
DEG_SPOP_SBC_1
0.3056
p.R432Q
HCT-15
large_intestine
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PLK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00537
COREAD|large_intestine
p.L335fs*68 (No)
GDSC
PLK_6522
0.0263
SIDM00213
THCA|thyroid
p.S163R (No)
GDSC
PLK_6522
0.1012
SIDM00145
ALL|lymphoblastic_leukemia
p.L603I (No)
GDSC
BI-2536
0.0223
SIDM00145
ALL|lymphoblastic_leukemia
p.L603I (No)
GDSC
PLK_6522
0.0104
SIDM00454
UNCLASSIFIED|rhabdomyosarcoma
p.S63W (No)
GDSC
PLK_6522
0.5713
SIDM00781
COREAD|large_intestine
p.L335fs*68 (No)
GDSC
BI-2536
0.0109
SIDM00781
COREAD|large_intestine
p.L335fs*68 (No)
GDSC
PLK_6522
1.1758
SIDM00881
BRCA|breast
p.A110T (No)
GDSC
PLK_6522
1.5141
SIDM00881
BRCA|breast
p.A110T (No)
GDSC
BI-2536
3.0073
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.H385Y (No)
GDSC
BI-2536
0.2197
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.H385Y (No)
GDSC
PLK_6522
0.1344
SIDM01051
UNCLASSIFIED|ovary
p.R296K (No)
GDSC
PLK_6522
0.1367
SIDM00341
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.G587V (No)
GDSC
PLK_6522
0.023
SIDM00958
LCML|chronic_myeloid_leukaemia
p.L335fs*68 (No)
GDSC
PLK_6522
0.0206
SIDM00151
OV|ovary
p.L335fs*68 (No)
GDSC
PLK_6522
12.2409
SIDM00373
UCEC|endometrium
p.L335fs*68 (No)
GDSC
PLK_6522
0.0129
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.R164T (No)
GDSC
BI-2536
0.3472
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.R164T (No)
GDSC
PLK_6522
0.0578
SIDM00630
BRCA|breast
p.D628N (No)
GDSC
PLK_6522
0.7349
SIDM00630
BRCA|breast
p.D628N (No)
GDSC
BI-2536
10.987
SIDM00630
BRCA|breast
p.D392H (No)
GDSC
PLK_6522
0.7349
SIDM00630
BRCA|breast
p.D392H (No)
GDSC
BI-2536
10.987
SIDM00405
DLBC|B_cell_lymphoma
p.I329M (No)
GDSC
BI-2536
0.0473
SIDM00405
DLBC|B_cell_lymphoma
p.I329M (No)
GDSC
PLK_6522
1.944
SIDM00140
SKCM|melanoma
p.P319S (No)
GDSC
PLK_6522
0.1346
SIDM00948
UNCLASSIFIED|Burkitt_lymphoma
p.D594G (No)
GDSC
BI-2536
0.1271
SIDM00948
UNCLASSIFIED|Burkitt_lymphoma
p.D594G (No)
GDSC
PLK_6522
0.1001
SIDM00839
COREAD|large_intestine
p.S636N (No)
GDSC
PLK_6522
0.0606
SIDM00282
COREAD|large_intestine
p.D560V (No)
GDSC
BI-2536
7.519
SIDM00282
COREAD|large_intestine
p.D560V (No)
GDSC
PLK_6522
0.905
SIDM00973
SKCM|melanoma
p.L643P (No)
GDSC
PLK_6522
0.0318
SIDM00878
BRCA|breast
p.L335fs*68 (No)
GDSC
PLK_6522
0.4074
SIDM00878
BRCA|breast
p.L335fs*68 (No)
GDSC
BI-2536
3.8832
SIDM00819
KIRC|kidney
p.N104S (No)
GDSC
PLK_6522
0.0701
SIDM00422
UNCLASSIFIED|Hodgkin_lymphoma
p.L310F (No)
GDSC
BI-2536
0.1578
SIDM00422
UNCLASSIFIED|Hodgkin_lymphoma
p.L310F (No)
GDSC
PLK_6522
0.1099
SIDM00789
COREAD|large_intestine
p.R446Q (No)
GDSC
PLK_6522
4.2953
SIDM00534
COREAD|large_intestine
p.R672* (No)
GDSC
PLK_6522
0.1358
SIDM00680
COREAD|large_intestine
p.L335fs*68 (No)
GDSC
PLK_6522
0.4107
SIDM00217
COREAD|large_intestine
p.L335fs*68 (No)
GDSC
PLK_6522
1.7973
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.I651V (No)
GDSC
BI-2536
0.0224
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.I651V (No)
GDSC
PLK_6522
0.8422
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.Q409R (No)
GDSC
BI-2536
0.0418
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.Q409R (No)
GDSC
PLK_6522
0.055
SIDM00537
COREAD|large_intestine
p.Y546C (No)
GDSC
PLK_6522
0.0263
SIDM00410
ALL|lymphoid_neoplasm_other
p.H545N (No)
GDSC
BI-2536
2.1317
SIDM00410
ALL|lymphoid_neoplasm_other
p.H545N (No)
GDSC
PLK_6522
1.9143
SIDM00657
UNCLASSIFIED|leukemia
p.H60D (No)
GDSC
BI-2536
0.0684
SIDM00657
UNCLASSIFIED|leukemia
p.H60D (No)
GDSC
PLK_6522
0.0187
SIDM00193
COREAD|large_intestine
p.R672* (No)
GDSC
PLK_6522
0.2636
SIDM00118
COREAD|large_intestine
p.R330Q (No)
GDSC
PLK_6522
0.0186
SIDM01109
UNCLASSIFIED|soft_tissue_other
p.M468T (No)
GDSC
BI-2536
0.0441
SIDM01109
UNCLASSIFIED|soft_tissue_other
p.M468T (No)
GDSC
PLK_6522
0.0183
All proteins holding degron of PPTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
410:414
PPTTT
SPOP
0.9659
More...
P06127
T-cell surface glycoprotein CD5
DEG_SPOP_SBC_1
146:150
PPTTT
SPOP
0.7038
More...
P14780
Matrix metalloproteinase-9
DEG_SPOP_SBC_1
453:457
PPTTT
SPOP
0.9889
More...
P49336
Cyclin-dependent kinase 8
DEG_SPOP_SBC_1
408:412
PPTTT
SPOP
0.9916
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1401:1405
PPTTT
SPOP
0.6712
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1417:1421
PPTTT
SPOP
0.7768
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1424:1428
PPTTT
SPOP
0.5001
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1433:1437
PPTTT
SPOP
0.9489
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1472:1476
PPTTT
SPOP
0.5727
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1518:1522
PPTTT
SPOP
0.6668
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1534:1538
PPTTT
SPOP
0.875
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1541:1545
PPTTT
SPOP
0.8682
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1557:1561
PPTTT
SPOP
0.9028
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1573:1577
PPTTT
SPOP
0.6471
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1613:1617
PPTTT
SPOP
0.6161
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1620:1624
PPTTT
SPOP
0.9877
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1636:1640
PPTTT
SPOP
0.8931
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1644:1648
PPTTT
SPOP
0.6445
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1676:1680
PPTTT
SPOP
0.8968
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1691:1695
PPTTT
SPOP
0.728
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1748:1752
PPTTT
SPOP
0.7782
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1895:1899
PPTTT
SPOP
0.5416
More...
Q13332
Receptor-type tyrosine-protein phosphatase S
DEG_SPOP_SBC_1
675:679
PPTTT
SPOP
0.9953
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
419:423
PPTTT
SPOP
0.9988
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1446:1450
PPTTT
SPOP
0.9943
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1572:1576
PPTTT
SPOP
0.9457
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
641:645
PPTTT
SPOP
0.9938
More...
Q76M96
Coiled-coil domain-containing protein 80
DEG_SPOP_SBC_1
396:400
PPTTT
SPOP
0.9674
More...
Q8N307
Mucin-20
DEG_SPOP_SBC_1
611:615
PPTTT
SPOP
0.92
More...
Q8TEQ8
GPI ethanolamine phosphate transferase 3
DEG_SPOP_SBC_1
127:131
PPTTT
SPOP
0.564
More...
Q9NP99
Triggering receptor expressed on myeloid cells 1
DEG_SPOP_SBC_1
155:159
PPTTT
SPOP
0.9954
More...
Q9NQS3
Nectin-3
DEG_SPOP_SBC_1
358:362
PPTTT
SPOP
0.9785
More...
Q9NXL9
DNA helicase MCM9
DEG_SPOP_SBC_1
1089:1093
PPTTT
SPOP
0.6174
More...
Q9NYY3
Serine/threonine-protein kinase PLK2
DEG_SPOP_SBC_1
422:426
PPTTT
SPOP
0.8683
More...
P43366
Melanoma-associated antigen B1
DEG_SPOP_SBC_1
65:69
PPTTT
SPOP
0.991
More...
A1L1A6
Immunoglobulin superfamily member 23
DEG_SPOP_SBC_1
19:23
PPTTT
SPOP
0.989
More...