DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTT
Uniprot ID:
Q9NXL9
Source protein:
DNA helicase MCM9
Source gene:
MCM9
Class:
DEG_SPOP_SBC_1
Location:
1089:1093
E3 ligase:
SPOP
DEGRON score:
0.6174
ASA_SCORE:
87.3
COIL:
0.9252
CONS_SCORE:
0.2084
DSS_SCORE:
0.7898
HELIX:
0.0414
FCONS_SCORE:
0.9296
RIG_SCORE:
0.5588
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1097C
TCGA-D5-6530
COAD
TCGA
PPTTT
DEG_SPOP_SBC_1
0.2222
p.R1097C
DO8312
COAD
ICGC
PPTTT
DEG_SPOP_SBC_1
0.2222
p.S1087I
DO233179
GACA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.7222
p.R1097H
DO233272
GACA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.2222
p.P1089T
DO228978
LICA
ICGC
PPTTT
DEG_SPOP_SBC_1
0.7031
p.G1082D
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.G1082D
ACH-000893
Lung Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.1389
p.G1082D
NCI-H1651
lung
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.T1091I
SIDM00683
Prostate Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.7078
p.T1091I
ACH-000977
lymph_node
CCLE
PPTTT
DEG_SPOP_SBC_1
0.7078
p.T1091I
LNCaP-Clone-FGC
prostate
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.7078
p.P1086S
SIDM00217
Colorectal Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.25
p.P1086S
ACH-000999
Colon/Colorectal Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.25
p.P1086S
SNU-1040
large_intestine
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.S1103Y
SIDM00118
Colorectal Carcinoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.5
p.S1103Y
ACH-001081
Colon/Colorectal Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.5
p.S1103Y
HCC2998
large_intestine
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.5
p.G1082S
SIDM00515
Melanoma
GDSC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.G1082S
ACH-000401
Skin Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.1389
p.G1082S
ACH-001339
Skin Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.1389
p.G1082S
COLO-800
skin
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.1389
p.R1081Q
ACH-001664
Gastric Cancer
CCLE
PPTTT
DEG_SPOP_SBC_1
0.1111
p.M1096V
H2722
pleura
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.M1096V
SU8686
pancreas
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.M1096V
A2058
skin
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.M1096V
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.M1096V
SK-MEL-24
skin
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.25
p.R1084K
LoVo
large_intestine
COSMIC
PPTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with MCM9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
410:414
PPTTT
SPOP
0.9659
More...
P06127
T-cell surface glycoprotein CD5
DEG_SPOP_SBC_1
146:150
PPTTT
SPOP
0.7038
More...
P14780
Matrix metalloproteinase-9
DEG_SPOP_SBC_1
453:457
PPTTT
SPOP
0.9889
More...
P49336
Cyclin-dependent kinase 8
DEG_SPOP_SBC_1
408:412
PPTTT
SPOP
0.9916
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1401:1405
PPTTT
SPOP
0.6712
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1417:1421
PPTTT
SPOP
0.7768
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1424:1428
PPTTT
SPOP
0.5001
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1433:1437
PPTTT
SPOP
0.9489
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1472:1476
PPTTT
SPOP
0.5727
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1518:1522
PPTTT
SPOP
0.6668
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1534:1538
PPTTT
SPOP
0.875
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1541:1545
PPTTT
SPOP
0.8682
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1557:1561
PPTTT
SPOP
0.9028
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1573:1577
PPTTT
SPOP
0.6471
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1613:1617
PPTTT
SPOP
0.6161
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1620:1624
PPTTT
SPOP
0.9877
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1636:1640
PPTTT
SPOP
0.8931
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1644:1648
PPTTT
SPOP
0.6445
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1676:1680
PPTTT
SPOP
0.8968
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1691:1695
PPTTT
SPOP
0.728
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1748:1752
PPTTT
SPOP
0.7782
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1895:1899
PPTTT
SPOP
0.5416
More...
Q13332
Receptor-type tyrosine-protein phosphatase S
DEG_SPOP_SBC_1
675:679
PPTTT
SPOP
0.9953
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
419:423
PPTTT
SPOP
0.9988
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1446:1450
PPTTT
SPOP
0.9943
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1572:1576
PPTTT
SPOP
0.9457
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
641:645
PPTTT
SPOP
0.9938
More...
Q76M96
Coiled-coil domain-containing protein 80
DEG_SPOP_SBC_1
396:400
PPTTT
SPOP
0.9674
More...
Q8N307
Mucin-20
DEG_SPOP_SBC_1
611:615
PPTTT
SPOP
0.92
More...
Q8TEQ8
GPI ethanolamine phosphate transferase 3
DEG_SPOP_SBC_1
127:131
PPTTT
SPOP
0.564
More...
Q9NP99
Triggering receptor expressed on myeloid cells 1
DEG_SPOP_SBC_1
155:159
PPTTT
SPOP
0.9954
More...
Q9NQS3
Nectin-3
DEG_SPOP_SBC_1
358:362
PPTTT
SPOP
0.9785
More...
Q9NXL9
DNA helicase MCM9
DEG_SPOP_SBC_1
1089:1093
PPTTT
SPOP
0.6174
More...
Q9NYY3
Serine/threonine-protein kinase PLK2
DEG_SPOP_SBC_1
422:426
PPTTT
SPOP
0.8683
More...
P43366
Melanoma-associated antigen B1
DEG_SPOP_SBC_1
65:69
PPTTT
SPOP
0.991
More...
A1L1A6
Immunoglobulin superfamily member 23
DEG_SPOP_SBC_1
19:23
PPTTT
SPOP
0.989
More...