DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PYSSS
Uniprot ID:
Q92922
Source protein:
SWI/SNF complex subunit SMARCC1
Source gene:
SMARCC1
Class:
DEG_SPOP_SBC_1
Location:
208:212
E3 ligase:
SPOP
DEGRON score:
0.9771
ASA_SCORE:
75.06
COIL:
0.8504
CONS_SCORE:
0.2423
DSS_SCORE:
0.4274
HELIX:
0.0568
FCONS_SCORE:
0.7889
RIG_SCORE:
0.6813
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E198D
TCGA-06-5416
GBM
TCGA
PYSSS
DEG_SPOP_SBC_1
0.0556
p.E198D
DO222884
COCA
ICGC
PYSSS
DEG_SPOP_SBC_1
0.0556
p.E198D
DO10880
GBM
ICGC
PYSSS
DEG_SPOP_SBC_1
0.0556
p.P208Q
TCGA-53-7626
LUAD
TCGA
PYSSS
DEG_SPOP_SBC_1
0.7035
p.P208Q
DO23774
LUAD
ICGC
PYSSS
DEG_SPOP_SBC_1
0.7035
p.E198Q
TCGA-56-A49D
LUSC
TCGA
PYSSS
DEG_SPOP_SBC_1
0.0556
p.E198Q
DO45475
LUSC
ICGC
PYSSS
DEG_SPOP_SBC_1
0.0556
p.D215N
DO228046
EOPC
ICGC
PYSSS
DEG_SPOP_SBC_1
0.25
p.S211F
DO222536
MELA
ICGC
PYSSS
DEG_SPOP_SBC_1
0.7982
p.P221L
SIDM00449
B-Lymphoblastic Leukemia
GDSC
PYSSS
DEG_SPOP_SBC_1
0.0833
p.P221L
SIDM00596
Endometrial Carcinoma
GDSC
PYSSS
DEG_SPOP_SBC_1
0.0833
p.P221L
ACH-000922
Leukemia
CCLE
PYSSS
DEG_SPOP_SBC_1
0.0833
p.P221L
ACH-001517
Endometrial/Uterine Cancer
CCLE
PYSSS
DEG_SPOP_SBC_1
0.0833
p.P221L
HEC-1
endometrium
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.0833
p.P221L
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with SMARCC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7KAX9
Rho GTPase-activating protein 32
DEG_SPOP_SBC_1
1652:1656
PYSSS
SPOP
0.9915
More...
A8MQ03
Cysteine-rich tail protein 1
DEG_SPOP_SBC_1
90:94
PYSSS
SPOP
0.6254
More...
O43166
Signal-induced proliferation-associated 1-like protein 1
DEG_SPOP_SBC_1
1726:1730
PYSSS
SPOP
0.9278
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
374:378
PYSSS
SPOP
0.9833
More...
Q14004
Cyclin-dependent kinase 13
DEG_SPOP_SBC_1
386:390
PYSSS
SPOP
0.9958
More...
Q92922
SWI/SNF complex subunit SMARCC1
DEG_SPOP_SBC_1
208:212
PYSSS
SPOP
0.9771
More...
Q9BWW4
Single-stranded DNA-binding protein 3
DEG_SPOP_SBC_1
257:261
PYSSS
SPOP
0.685
More...
Q9NZM3
Intersectin-2
DEG_SPOP_SBC_1
181:185
PYSSS
SPOP
0.983
More...
Q9UL40
Zinc finger protein 346
DEG_SPOP_SBC_1
19:23
PYSSS
SPOP
0.9528
More...
Q9UQB3
Catenin delta-2
DEG_SPOP_SBC_1
1050:1054
PYSSS
SPOP
0.7199
More...
Q9Y5X4
Photoreceptor-specific nuclear receptor
DEG_SPOP_SBC_1
208:212
PYSSS
SPOP
0.9744
More...
Q8WYQ9
Zinc finger CCHC domain-containing protein 14
DEG_SPOP_SBC_1
853:857
PYSSS
SPOP
0.6609
More...
Q53SF7
Cordon-bleu protein-like 1
DEG_SPOP_SBC_1
979:983
PYSSS
SPOP
0.9833
More...
Q9BWG4
Single-stranded DNA-binding protein 4
DEG_SPOP_SBC_1
252:256
PYSSS
SPOP
0.9926
More...
Q9BZE3
BarH-like 1 homeobox protein
DEG_SPOP_SBC_1
113:117
PYSSS
SPOP
0.8569
More...