DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PYSSS
Uniprot ID:
Q9BWW4
Source protein:
Single-stranded DNA-binding protein 3
Source gene:
SSBP3
Class:
DEG_SPOP_SBC_1
Location:
257:261
E3 ligase:
SPOP
DEGRON score:
0.685
ASA_SCORE:
60.48
COIL:
0.9036
CONS_SCORE:
0.4359
DSS_SCORE:
0.5492
HELIX:
0.0364
FCONS_SCORE:
0.9572
RIG_SCORE:
0.5736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S259F
TCGA-A5-A1OF
UCEC
TCGA
PYSSS
DEG_SPOP_SBC_1
0.7982
p.Y258C
TCGA-BG-A18B
UCEC
TCGA
PYSSS
DEG_SPOP_SBC_1
0.5976
p.A258T
DO9594
COAD
ICGC
PYSSS
DEG_SPOP_SBC_1
0.7139
p.A258T
IM-95
stomach
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.7139
p.S261L
SIDM00782
Colorectal Carcinoma
GDSC
PYSSS
DEG_SPOP_SBC_1
0.7667
p.S261L
ACH-000381
Colon/Colorectal Cancer
CCLE
PYSSS
DEG_SPOP_SBC_1
0.7667
p.S261L
T84
large_intestine
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.7667
p.G270S
COLO-792
skin
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.0833
p.A250T
IM-95
stomach
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.1389
p.D268N
LoVo
large_intestine
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.1389
p.A265T
IM-95
stomach
COSMIC
PYSSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with SSBP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7KAX9
Rho GTPase-activating protein 32
DEG_SPOP_SBC_1
1652:1656
PYSSS
SPOP
0.9915
More...
A8MQ03
Cysteine-rich tail protein 1
DEG_SPOP_SBC_1
90:94
PYSSS
SPOP
0.6254
More...
O43166
Signal-induced proliferation-associated 1-like protein 1
DEG_SPOP_SBC_1
1726:1730
PYSSS
SPOP
0.9278
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
374:378
PYSSS
SPOP
0.9833
More...
Q14004
Cyclin-dependent kinase 13
DEG_SPOP_SBC_1
386:390
PYSSS
SPOP
0.9958
More...
Q92922
SWI/SNF complex subunit SMARCC1
DEG_SPOP_SBC_1
208:212
PYSSS
SPOP
0.9771
More...
Q9BWW4
Single-stranded DNA-binding protein 3
DEG_SPOP_SBC_1
257:261
PYSSS
SPOP
0.685
More...
Q9NZM3
Intersectin-2
DEG_SPOP_SBC_1
181:185
PYSSS
SPOP
0.983
More...
Q9UL40
Zinc finger protein 346
DEG_SPOP_SBC_1
19:23
PYSSS
SPOP
0.9528
More...
Q9UQB3
Catenin delta-2
DEG_SPOP_SBC_1
1050:1054
PYSSS
SPOP
0.7199
More...
Q9Y5X4
Photoreceptor-specific nuclear receptor
DEG_SPOP_SBC_1
208:212
PYSSS
SPOP
0.9744
More...
Q8WYQ9
Zinc finger CCHC domain-containing protein 14
DEG_SPOP_SBC_1
853:857
PYSSS
SPOP
0.6609
More...
Q53SF7
Cordon-bleu protein-like 1
DEG_SPOP_SBC_1
979:983
PYSSS
SPOP
0.9833
More...
Q9BWG4
Single-stranded DNA-binding protein 4
DEG_SPOP_SBC_1
252:256
PYSSS
SPOP
0.9926
More...
Q9BZE3
BarH-like 1 homeobox protein
DEG_SPOP_SBC_1
113:117
PYSSS
SPOP
0.8569
More...