DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATST
Uniprot ID:
O00592
Source protein:
Podocalyxin
Source gene:
PODXL
Class:
DEG_SPOP_SBC_1
Location:
134:138
E3 ligase:
SPOP
DEGRON score:
0.9934
ASA_SCORE:
84.88
COIL:
0.9158
CONS_SCORE:
0.4333
DSS_SCORE:
0.5916
HELIX:
0.0166
FCONS_SCORE:
1.2407
RIG_SCORE:
0.7305
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K127N
TCGA-K7-A5RG
LIHC
TCGA
VATST
DEG_SPOP_SBC_1
0.25
p.T128A
DO48368
BLCA
ICGC
VATST
DEG_SPOP_SBC_1
0.6111
p.A141D
DO229028
LICA
ICGC
VATST
DEG_SPOP_SBC_1
0.25
Drug responses associated with PODXL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
134:138
VATST
SPOP
0.9934
More...
Q13105
Zinc finger and BTB domain-containing protein 17
DEG_SPOP_SBC_1
142:146
VATST
SPOP
0.6095
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
442:446
VATST
SPOP
0.9946
More...
Q5GH76
XK-related protein 4
DEG_SPOP_SBC_1
541:545
VATST
SPOP
0.7319
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1517:1521
VATST
SPOP
0.9996
More...
Q92766
Ras-responsive element-binding protein 1
DEG_SPOP_SBC_1
519:523
VATST
SPOP
0.9773
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1122:1126
VATST
SPOP
0.879
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1386:1390
VATST
SPOP
0.9581
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1688:1692
VATST
SPOP
0.9913
More...
Q8WZ64
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
310:314
VATST
SPOP
0.9982
More...