DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VATST
Uniprot ID:
Q8WZ64
Source protein:
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Source gene:
ARAP2
Class:
DEG_SPOP_SBC_1
Location:
310:314
E3 ligase:
SPOP
DEGRON score:
0.9982
ASA_SCORE:
80.84
COIL:
0.916
CONS_SCORE:
0.3274
DSS_SCORE:
0.4008
HELIX:
0.0504
FCONS_SCORE:
1.0047
RIG_SCORE:
0.7341
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S302I
TCGA-49-AARE
LUAD
TCGA
VATST
DEG_SPOP_SBC_1
0.5556
p.S302I
DO218922
LUAD
ICGC
VATST
DEG_SPOP_SBC_1
0.5556
p.R305H
TCGA-AJ-A8CT
UCEC
TCGA
VATST
DEG_SPOP_SBC_1
0.1944
p.R305H
DO52399
UCEC
ICGC
VATST
DEG_SPOP_SBC_1
0.1944
p.N309Y
TCGA-DD-A116
LIHC
TCGA
VATST
DEG_SPOP_SBC_1
0.3056
p.R305C
TCGA-EE-A20C
SKCM
TCGA
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
DO222775
MELA
ICGC
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
DO47665
SKCM
ICGC
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
SIDM00447
B-Lymphoblastic Leukemia
GDSC
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
SIDM01596
Non-Small Cell Lung Carcinoma
GDSC
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
ACH-000066
Lung Cancer
CCLE
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
ACH-000300
Kidney Cancer
CCLE
VATST
DEG_SPOP_SBC_1
0.1944
p.R305C
ACH-000960
Leukemia
CCLE
VATST
DEG_SPOP_SBC_1
0.1944
p.K316Q
DO222884
COCA
ICGC
VATST
DEG_SPOP_SBC_1
0.2778
p.E315K
DO222875
MELA
ICGC
VATST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with ARAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
134:138
VATST
SPOP
0.9934
More...
Q13105
Zinc finger and BTB domain-containing protein 17
DEG_SPOP_SBC_1
142:146
VATST
SPOP
0.6095
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
442:446
VATST
SPOP
0.9946
More...
Q5GH76
XK-related protein 4
DEG_SPOP_SBC_1
541:545
VATST
SPOP
0.7319
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1517:1521
VATST
SPOP
0.9996
More...
Q92766
Ras-responsive element-binding protein 1
DEG_SPOP_SBC_1
519:523
VATST
SPOP
0.9773
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1122:1126
VATST
SPOP
0.879
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1386:1390
VATST
SPOP
0.9581
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1688:1692
VATST
SPOP
0.9913
More...
Q8WZ64
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
310:314
VATST
SPOP
0.9982
More...