DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGTSS
Uniprot ID:
A4D161
Source protein:
Protein FAM221A
Source gene:
FAM221A
Class:
DEG_SPOP_SBC_1
Location:
249:253
E3 ligase:
SPOP
DEGRON score:
0.845
ASA_SCORE:
65.84
COIL:
0.7252
CONS_SCORE:
0.2843
DSS_SCORE:
0.5923
HELIX:
0.2508
FCONS_SCORE:
0.9082
RIG_SCORE:
0.6436
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E263A
TCGA-D3-A3C8
SKCM
TCGA
VGTSS
DEG_SPOP_SBC_1
0.0556
p.T245P
TCGA-DX-A3UA
SARC
TCGA
VGTSS
DEG_SPOP_SBC_1
0.2222
p.T245M
SIDM00321
Ovarian Carcinoma
GDSC
VGTSS
DEG_SPOP_SBC_1
0.2222
p.T245M
ACH-000430
Ovarian Cancer
CCLE
VGTSS
DEG_SPOP_SBC_1
0.2222
p.T245M
TYK-nu
ovary
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.2222
p.P261T
SIDM00001
Other Blood Cancers
GDSC
VGTSS
DEG_SPOP_SBC_1
0.1111
p.S256F
SIDM00938
Breast Carcinoma
GDSC
VGTSS
DEG_SPOP_SBC_1
0.25
p.S256F
ACH-000902
Breast Cancer
CCLE
VGTSS
DEG_SPOP_SBC_1
0.25
p.S256F
CAL-148
breast
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.25
p.K250E
NCI-H64
lung
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.7022
Drug responses associated with FAM221A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D161
Protein FAM221A
DEG_SPOP_SBC_1
249:253
VGTSS
SPOP
0.845
More...
O14497
AT-rich interactive domain-containing protein 1A
DEG_SPOP_SBC_1
1082:1086
VGTSS
SPOP
0.8602
More...
O75461
Transcription factor E2F6
DEG_SPOP_SBC_1
251:255
VGTSS
SPOP
0.9975
More...
P08397
Porphobilinogen deaminase
DEG_SPOP_SBC_1
143:147
VGTSS
SPOP
0.5283
More...
P43119
Prostacyclin receptor
DEG_SPOP_SBC_1
371:375
VGTSS
SPOP
0.9613
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
2159:2163
VGTSS
SPOP
0.9597
More...
Q8NFD5
AT-rich interactive domain-containing protein 1B
DEG_SPOP_SBC_1
1118:1122
VGTSS
SPOP
0.5867
More...
Q8TE68
Epidermal growth factor receptor kinase substrate 8-like protein 1
DEG_SPOP_SBC_1
229:233
VGTSS
SPOP
0.9487
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7482:7486
VGTSS
SPOP
0.9982
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8061:8065
VGTSS
SPOP
0.9927
More...
Q9C0B0
RING finger protein unkempt homolog
DEG_SPOP_SBC_1
489:493
VGTSS
SPOP
0.9747
More...
Q9NQX0
Putative histone-lysine N-methyltransferase PRDM6
DEG_SPOP_SBC_1
223:227
VGTSS
SPOP
0.9484
More...
P86434
Putative uncharacterized protein ADORA2A-AS1
DEG_SPOP_SBC_1
48:52
VGTSS
SPOP
0.7315
More...