DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VGTSS
Uniprot ID:
Q8NFD5
Source protein:
AT-rich interactive domain-containing protein 1B
Source gene:
ARID1B
Class:
DEG_SPOP_SBC_1
Location:
1118:1122
E3 ligase:
SPOP
DEGRON score:
0.5867
ASA_SCORE:
63.18
COIL:
0.8884
CONS_SCORE:
0.5163
DSS_SCORE:
0.2227
HELIX:
0.0604
FCONS_SCORE:
0.8908
RIG_SCORE:
0.7284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1112C
TCGA-D3-A2J6
SKCM
TCGA
VGTSS
DEG_SPOP_SBC_1
0.1667
p.G1112C
DO37901
SKCM
ICGC
VGTSS
DEG_SPOP_SBC_1
0.1667
p.N1119S
TCGA-DU-6392
LGG
TCGA
VGTSS
DEG_SPOP_SBC_1
0.7069
p.N1119S
DO22237
LGG
ICGC
VGTSS
DEG_SPOP_SBC_1
0.7069
p.E1124K
TCGA-ZF-AA51
BLCA
TCGA
VGTSS
DEG_SPOP_SBC_1
0.2778
p.E1124K
DO219093
BLCA
ICGC
VGTSS
DEG_SPOP_SBC_1
0.2778
p.L1129R
DO234188
ESAD
ICGC
VGTSS
DEG_SPOP_SBC_1
0.25
p.G1111R
DO23338
LINC
ICGC
VGTSS
DEG_SPOP_SBC_1
0.1389
p.G1111R
ACH-000449
Sarcoma
CCLE
VGTSS
DEG_SPOP_SBC_1
0.1389
p.G1111R
MES-SA
soft_tissue
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.1389
p.G1112D
DO32887
PACA
ICGC
VGTSS
DEG_SPOP_SBC_1
0.1667
p.L1129P
DO229459
SKCA
ICGC
VGTSS
DEG_SPOP_SBC_1
0.25
p.A1132V
SIDM01088
Endometrial Carcinoma
GDSC
VGTSS
DEG_SPOP_SBC_1
0.0556
p.A1132V
RL95-2
endometrium
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.0556
p.D1114N
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
VGTSS
DEG_SPOP_SBC_1
0.6667
p.D1114N
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.6667
p.L1130R
SIDM00137
Non-Small Cell Lung Carcinoma
GDSC
VGTSS
DEG_SPOP_SBC_1
0.2222
p.L1130R
NCI-H3122
lung
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.2222
p.D1108N
NCI-H630
large_intestine
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.1667
p.D1115N
NCI-H630
large_intestine
COSMIC
VGTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ARID1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D161
Protein FAM221A
DEG_SPOP_SBC_1
249:253
VGTSS
SPOP
0.845
More...
O14497
AT-rich interactive domain-containing protein 1A
DEG_SPOP_SBC_1
1082:1086
VGTSS
SPOP
0.8602
More...
O75461
Transcription factor E2F6
DEG_SPOP_SBC_1
251:255
VGTSS
SPOP
0.9975
More...
P08397
Porphobilinogen deaminase
DEG_SPOP_SBC_1
143:147
VGTSS
SPOP
0.5283
More...
P43119
Prostacyclin receptor
DEG_SPOP_SBC_1
371:375
VGTSS
SPOP
0.9613
More...
Q6W4X9
Mucin-6
DEG_SPOP_SBC_1
2159:2163
VGTSS
SPOP
0.9597
More...
Q8NFD5
AT-rich interactive domain-containing protein 1B
DEG_SPOP_SBC_1
1118:1122
VGTSS
SPOP
0.5867
More...
Q8TE68
Epidermal growth factor receptor kinase substrate 8-like protein 1
DEG_SPOP_SBC_1
229:233
VGTSS
SPOP
0.9487
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7482:7486
VGTSS
SPOP
0.9982
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8061:8065
VGTSS
SPOP
0.9927
More...
Q9C0B0
RING finger protein unkempt homolog
DEG_SPOP_SBC_1
489:493
VGTSS
SPOP
0.9747
More...
Q9NQX0
Putative histone-lysine N-methyltransferase PRDM6
DEG_SPOP_SBC_1
223:227
VGTSS
SPOP
0.9484
More...
P86434
Putative uncharacterized protein ADORA2A-AS1
DEG_SPOP_SBC_1
48:52
VGTSS
SPOP
0.7315
More...