DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VITSS
Uniprot ID:
O95677
Source protein:
Eyes absent homolog 4
Source gene:
EYA4
Class:
DEG_SPOP_SBC_1
Location:
124:128
E3 ligase:
SPOP
DEGRON score:
0.9997
ASA_SCORE:
70.4
COIL:
0.8224
CONS_SCORE:
0.363
DSS_SCORE:
0.4407
HELIX:
0.052
FCONS_SCORE:
1.0566
RIG_SCORE:
0.7136
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A116V
TCGA-A5-A2K3
UCEC
TCGA
VITSS
DEG_SPOP_SBC_1
0.1111
p.A116V
DO43899
UCEC
ICGC
VITSS
DEG_SPOP_SBC_1
0.1111
p.L117P
TCGA-CK-5916
COAD
TCGA
VITSS
DEG_SPOP_SBC_1
0.1389
p.L117P
DO8786
COAD
ICGC
VITSS
DEG_SPOP_SBC_1
0.1389
p.G122R
TCGA-GN-A8LK
SKCM
TCGA
VITSS
DEG_SPOP_SBC_1
0.2778
p.G122R
DO51259
SKCM
ICGC
VITSS
DEG_SPOP_SBC_1
0.2778
p.D114N
TCGA-HU-A4HD
STAD
TCGA
VITSS
DEG_SPOP_SBC_1
0.0556
p.D114N
DO47989
STAD
ICGC
VITSS
DEG_SPOP_SBC_1
0.0556
p.Y138H
DO225232
BRCA
ICGC
VITSS
DEG_SPOP_SBC_1
0.0556
p.G129R
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
VITSS
DEG_SPOP_SBC_1
0.3056
p.G129R
NCI-H23
lung
COSMIC
VITSS
DEG_SPOP_SBC_1
0.3056
p.P137H
ACH-000749
Lung Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.0833
p.P137H
DMS-273
lung
COSMIC
VITSS
DEG_SPOP_SBC_1
0.0833
p.I128V
H-EMC-SS
bone
COSMIC
VITSS
DEG_SPOP_SBC_1
0.7076
p.S116L
Sarc9371
bone
COSMIC
VITSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with EYA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00764
Pyridoxal kinase
DEG_SPOP_SBC_1
184:188
VITSS
SPOP
0.6795
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
606:610
VITSS
SPOP
0.5785
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
124:128
VITSS
SPOP
0.9997
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
332:336
VITSS
SPOP
0.9963
More...
Q6GYQ0
Ral GTPase-activating protein subunit alpha-1
DEG_SPOP_SBC_1
456:460
VITSS
SPOP
0.9959
More...
Q6WRI0
Immunoglobulin superfamily member 10
DEG_SPOP_SBC_1
1176:1180
VITSS
SPOP
0.918
More...
Q8IZD4
mRNA-decapping enzyme 1B
DEG_SPOP_SBC_1
571:575
VITSS
SPOP
0.9737
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5819:5823
VITSS
SPOP
0.9816
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
444:448
VITSS
SPOP
0.9233
More...