DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VITSS
Uniprot ID:
Q6GYQ0
Source protein:
Ral GTPase-activating protein subunit alpha-1
Source gene:
RALGAPA1
Class:
DEG_SPOP_SBC_1
Location:
456:460
E3 ligase:
SPOP
DEGRON score:
0.9959
ASA_SCORE:
74.38
COIL:
0.8142
CONS_SCORE:
0.2758
DSS_SCORE:
0.4518
HELIX:
0.0786
FCONS_SCORE:
0.8113
RIG_SCORE:
0.7943
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L462F
TCGA-AA-3986
COAD
TCGA
VITSS
DEG_SPOP_SBC_1
0.2778
p.L462F
DO8216
COAD
ICGC
VITSS
DEG_SPOP_SBC_1
0.2778
p.P463T
TCGA-BQ-7060
KIRP
TCGA
VITSS
DEG_SPOP_SBC_1
0.25
p.P463T
DO20831
KIRP
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
p.C464S
TCGA-Q1-A73O
CESC
TCGA
VITSS
DEG_SPOP_SBC_1
0.2222
p.C464S
DO51612
CESC
ICGC
VITSS
DEG_SPOP_SBC_1
0.2222
p.P463L
TCGA-WE-A8ZX
SKCM
TCGA
VITSS
DEG_SPOP_SBC_1
0.25
p.P463L
DO51291
SKCM
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
p.P463S
TCGA-WE-A8ZX
SKCM
TCGA
VITSS
DEG_SPOP_SBC_1
0.25
p.P463S
DO219871
SKCA
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
p.P463S
DO51291
SKCM
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
p.P446L
SIDM00007
Other Solid Cancers
GDSC
VITSS
DEG_SPOP_SBC_1
0.0556
p.P446L
ACH-001550
Skin Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.0556
p.P446L
MCC13
skin
COSMIC
VITSS
DEG_SPOP_SBC_1
0.0556
p.P446S
SIDM00007
Other Solid Cancers
GDSC
VITSS
DEG_SPOP_SBC_1
0.0556
p.P446S
ACH-001550
Skin Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.0556
p.P446S
MCC13
skin
COSMIC
VITSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with RALGAPA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00764
Pyridoxal kinase
DEG_SPOP_SBC_1
184:188
VITSS
SPOP
0.6795
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
606:610
VITSS
SPOP
0.5785
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
124:128
VITSS
SPOP
0.9997
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
332:336
VITSS
SPOP
0.9963
More...
Q6GYQ0
Ral GTPase-activating protein subunit alpha-1
DEG_SPOP_SBC_1
456:460
VITSS
SPOP
0.9959
More...
Q6WRI0
Immunoglobulin superfamily member 10
DEG_SPOP_SBC_1
1176:1180
VITSS
SPOP
0.918
More...
Q8IZD4
mRNA-decapping enzyme 1B
DEG_SPOP_SBC_1
571:575
VITSS
SPOP
0.9737
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5819:5823
VITSS
SPOP
0.9816
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
444:448
VITSS
SPOP
0.9233
More...