DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VITSS
Uniprot ID:
Q9Y467
Source protein:
Sal-like protein 2
Source gene:
SALL2
Class:
DEG_SPOP_SBC_1
Location:
444:448
E3 ligase:
SPOP
DEGRON score:
0.9233
ASA_SCORE:
64.84
COIL:
0.7204
CONS_SCORE:
0.4018
DSS_SCORE:
0.4271
HELIX:
0.0692
FCONS_SCORE:
0.8498
RIG_SCORE:
0.7468
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D442H
TCGA-92-8065
LUSC
TCGA
VITSS
DEG_SPOP_SBC_1
0.2778
p.V456M
TCGA-AP-A059
UCEC
TCGA
VITSS
DEG_SPOP_SBC_1
0.1111
p.S455Y
TCGA-CN-4738
HNSC
TCGA
VITSS
DEG_SPOP_SBC_1
0.1389
p.V444L
TCGA-E7-A541
BLCA
TCGA
VITSS
DEG_SPOP_SBC_1
0.6765
p.P434L
TCGA-EE-A3J5
SKCM
TCGA
VITSS
DEG_SPOP_SBC_1
0.0556
p.E451G
DO50319
ESAD
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
p.T452K
DO229025
LICA
ICGC
VITSS
DEG_SPOP_SBC_1
0.2222
p.Y443C
SIDM00537
Colorectal Carcinoma
GDSC
VITSS
DEG_SPOP_SBC_1
0.3056
p.Y443C
ACH-000982
Colon/Colorectal Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.3056
p.Y443C
ACH-001345
Colon/Colorectal Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.3056
p.Y443C
GP5d
large_intestine
COSMIC
VITSS
DEG_SPOP_SBC_1
0.3056
p.P439S
MCC13
skin
COSMIC
VITSS
DEG_SPOP_SBC_1
0.1944
p.P444S
CW-2
large_intestine
COSMIC
VITSS
DEG_SPOP_SBC_1
0.6752
Drug responses associated with SALL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00764
Pyridoxal kinase
DEG_SPOP_SBC_1
184:188
VITSS
SPOP
0.6795
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
606:610
VITSS
SPOP
0.5785
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
124:128
VITSS
SPOP
0.9997
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
332:336
VITSS
SPOP
0.9963
More...
Q6GYQ0
Ral GTPase-activating protein subunit alpha-1
DEG_SPOP_SBC_1
456:460
VITSS
SPOP
0.9959
More...
Q6WRI0
Immunoglobulin superfamily member 10
DEG_SPOP_SBC_1
1176:1180
VITSS
SPOP
0.918
More...
Q8IZD4
mRNA-decapping enzyme 1B
DEG_SPOP_SBC_1
571:575
VITSS
SPOP
0.9737
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5819:5823
VITSS
SPOP
0.9816
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
444:448
VITSS
SPOP
0.9233
More...