DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
VITSS
Uniprot ID:
Q8IZD4
Source protein:
mRNA-decapping enzyme 1B
Source gene:
DCP1B
Class:
DEG_SPOP_SBC_1
Location:
571:575
E3 ligase:
SPOP
DEGRON score:
0.9737
ASA_SCORE:
80.3
COIL:
0.9422
CONS_SCORE:
0.4291
DSS_SCORE:
0.3335
HELIX:
0.0212
FCONS_SCORE:
0.9578
RIG_SCORE:
0.7415
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I564V
TCGA-AD-6964
COAD
TCGA
VITSS
DEG_SPOP_SBC_1
0.1389
p.V571M
SIDM02050
Colorectal Carcinoma
GDSC
VITSS
DEG_SPOP_SBC_1
0.7208
p.Q583R
SIDM00162
Biliary Tract Carcinoma
GDSC
VITSS
DEG_SPOP_SBC_1
0.1111
p.Q583R
ACH-000268
Bile Duct Cancer
CCLE
VITSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with DCP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00764
Pyridoxal kinase
DEG_SPOP_SBC_1
184:188
VITSS
SPOP
0.6795
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
606:610
VITSS
SPOP
0.5785
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
124:128
VITSS
SPOP
0.9997
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
332:336
VITSS
SPOP
0.9963
More...
Q6GYQ0
Ral GTPase-activating protein subunit alpha-1
DEG_SPOP_SBC_1
456:460
VITSS
SPOP
0.9959
More...
Q6WRI0
Immunoglobulin superfamily member 10
DEG_SPOP_SBC_1
1176:1180
VITSS
SPOP
0.918
More...
Q8IZD4
mRNA-decapping enzyme 1B
DEG_SPOP_SBC_1
571:575
VITSS
SPOP
0.9737
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5819:5823
VITSS
SPOP
0.9816
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
444:448
VITSS
SPOP
0.9233
More...