DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VITSS
Uniprot ID:
P28324
Source protein:
ETS domain-containing protein Elk-4
Source gene:
ELK4
Class:
DEG_SPOP_SBC_1
Location:
332:336
E3 ligase:
SPOP
DEGRON score:
0.9963
ASA_SCORE:
73.52
COIL:
0.7906
CONS_SCORE:
0.477
DSS_SCORE:
0.3618
HELIX:
0.0164
FCONS_SCORE:
0.8372
RIG_SCORE:
0.7343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I333T
TCGA-BK-A13B
UCEC
TCGA
VITSS
DEG_SPOP_SBC_1
0.5966
p.I333T
DO40825
UCEC
ICGC
VITSS
DEG_SPOP_SBC_1
0.5966
p.P329S
TCGA-BR-4201
STAD
TCGA
VITSS
DEG_SPOP_SBC_1
0.25
p.P329S
DO38707
STAD
ICGC
VITSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ELK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00764
Pyridoxal kinase
DEG_SPOP_SBC_1
184:188
VITSS
SPOP
0.6795
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
606:610
VITSS
SPOP
0.5785
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
124:128
VITSS
SPOP
0.9997
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
332:336
VITSS
SPOP
0.9963
More...
Q6GYQ0
Ral GTPase-activating protein subunit alpha-1
DEG_SPOP_SBC_1
456:460
VITSS
SPOP
0.9959
More...
Q6WRI0
Immunoglobulin superfamily member 10
DEG_SPOP_SBC_1
1176:1180
VITSS
SPOP
0.918
More...
Q8IZD4
mRNA-decapping enzyme 1B
DEG_SPOP_SBC_1
571:575
VITSS
SPOP
0.9737
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5819:5823
VITSS
SPOP
0.9816
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
444:448
VITSS
SPOP
0.9233
More...