DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSTS
Uniprot ID:
P0C6C1
Source protein:
Ankyrin repeat domain-containing protein 34C
Source gene:
ANKRD34C
Class:
DEG_SPOP_SBC_1
Location:
426:430
E3 ligase:
SPOP
DEGRON score:
0.9869
ASA_SCORE:
68.7
COIL:
0.9338
CONS_SCORE:
0.3293
DSS_SCORE:
0.7189
HELIX:
0.0236
FCONS_SCORE:
0.7962
RIG_SCORE:
0.5888
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P427L
TCGA-BG-A222
UCEC
TCGA
VPSTS
DEG_SPOP_SBC_1
0.6471
p.P427L
TCGA-LN-A4MR
ESCA
TCGA
VPSTS
DEG_SPOP_SBC_1
0.6471
p.P427L
DO42977
UCEC
ICGC
VPSTS
DEG_SPOP_SBC_1
0.6471
p.R436H
TCGA-CM-6170
COAD
TCGA
VPSTS
DEG_SPOP_SBC_1
0.1667
p.R436H
DO7849
COAD
ICGC
VPSTS
DEG_SPOP_SBC_1
0.1667
p.R436C
DO9732
COAD
ICGC
VPSTS
DEG_SPOP_SBC_1
0.1667
p.G418V
DO229025
LICA
ICGC
VPSTS
DEG_SPOP_SBC_1
0.1111
p.R436L
DO229031
LICA
ICGC
VPSTS
DEG_SPOP_SBC_1
0.1667
p.H440Q
DO26469
LUSC
ICGC
VPSTS
DEG_SPOP_SBC_1
0.0556
p.S428G
SIDM01954
Colorectal Carcinoma
GDSC
VPSTS
DEG_SPOP_SBC_1
0.6993
Drug responses associated with ANKRD34C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94966
Ubiquitin carboxyl-terminal hydrolase 19
DEG_SPOP_SBC_1
938:942
VPSTS
SPOP
0.9914
More...
O95665
Neurotensin receptor type 2
DEG_SPOP_SBC_1
240:244
VPSTS
SPOP
0.8867
More...
P24386
Rab proteins geranylgeranyltransferase component A 1
DEG_SPOP_SBC_1
188:192
VPSTS
SPOP
0.9827
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4260:4264
VPSTS
SPOP
0.9795
More...
Q5THJ4
Intermembrane lipid transfer protein VPS13D
DEG_SPOP_SBC_1
2123:2127
VPSTS
SPOP
0.9469
More...
Q6VY07
Phosphofurin acidic cluster sorting protein 1
DEG_SPOP_SBC_1
777:781
VPSTS
SPOP
0.9965
More...
Q86WV6
Stimulator of interferon genes protein
DEG_SPOP_SBC_1
351:355
VPSTS
SPOP
0.9975
More...
Q92574
Hamartin
DEG_SPOP_SBC_1
640:644
VPSTS
SPOP
0.9829
More...
Q92772
Cyclin-dependent kinase-like 2
DEG_SPOP_SBC_1
389:393
VPSTS
SPOP
0.9663
More...
Q96PU4
E3 ubiquitin-protein ligase UHRF2
DEG_SPOP_SBC_1
192:196
VPSTS
SPOP
0.993
More...
Q9HCI5
Melanoma-associated antigen E1
DEG_SPOP_SBC_1
159:163
VPSTS
SPOP
0.9657
More...
Q8TBF4
Zinc finger CCHC-type and RNA-binding motif-containing protein 1
DEG_SPOP_SBC_1
191:195
VPSTS
SPOP
0.989
More...
P0C6C1
Ankyrin repeat domain-containing protein 34C
DEG_SPOP_SBC_1
426:430
VPSTS
SPOP
0.9869
More...